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H2-18-all-fractions_k255_3292708

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_3292708_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1..570)
DNA (570bp) protein (190aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Patulibacter americanus RepID=UPI0003B6D7D4
H2-18-all-fractions_k255_3292708_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(567..1775)
DNA (1209bp) protein (403aa)
Glycosyl transferase family 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F029_CONWI
family 2 glycosyl transferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
H2-18-all-fractions_k255_3292708_3
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1768..2655)
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UE00_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG74558.1}; Flags: Precursor;; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
H2-18-all-fractions_k255_3292708_4
unknown

Not on your lists

comp(2662..3084)
DNA (423bp) protein (141aa)

This feature has no annotations

H2-18-all-fractions_k255_3292708_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3209..4342)
DNA (1134bp) protein (378aa)
Thiamin pyrophosphokinase catalytic region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCZ0_CONWI
Thiamin pyrophosphokinase catalytic region
Thiamin pyrophosphokinase catalytic region {ECO:0000313|EMBL:ADB51502.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H2-18-all-fractions_k255_3292708_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(4339..5982)
DNA (1644bp) protein (548aa)
DNA repair protein RecN n=1 Tax=Patulibacter americanus RepID=UPI0003B3A37D
DNA repair protein RecN
Tax=RBG_16_Actinobacteria_67_10_curated
H2-18-all-fractions_k255_3292708_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6221..7042)
DNA (822bp) protein (274aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
ATP-NAD kinase n=1 Tax=Patulibacter americanus RepID=UPI0003B33A7E
ATP-NAD/AcoX kinase
H2-18-all-fractions_k255_3292708_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7047..7811)
DNA (765bp) protein (255aa)
Hemolysin A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCY7_CONWI
hemolysin A
Hemolysin A {ECO:0000313|EMBL:ADB51499.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H2-18-all-fractions_k255_3292708_9
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7808..8557)
DNA (750bp) protein (250aa)
Nucleotide-binding protein-like protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ELP1_METSB
hypothetical protein
Nucleotide-binding protein-like protein {ECO:0000313|EMBL:ACK50035.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
H2-18-all-fractions_k255_3292708_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8554..9321)
DNA (768bp) protein (256aa)
Polyprenyl synthetase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCY2_CONWI
polyprenyl synthetase
Polyprenyl synthetase {ECO:0000313|EMBL:ADB51494.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H2-18-all-fractions_k255_3292708_11
unknown

Not on your lists

comp(9308..9511)
DNA (204bp) protein (68aa)

This feature has no annotations

H2-18-all-fractions_k255_3292708_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9508..9885)
DNA (378bp) protein (126aa)
nitrogen utilization protein B n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B2E453
NusB antitermination factor
Tax=RBG_16_Actinobacteria_67_10_curated
H2-18-all-fractions_k255_3292708_13
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9882..10181)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B6K5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDP91248.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
hypothetical protein
H2-18-all-fractions_k255_3292708_14
Slackia exigua, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10178..11527)
DNA (1350bp) protein (450aa)
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:EEZ61409.1}; EC=6.3.4.14 {ECO:0000313|EMBL:EEZ61409.1};; TaxID=649764 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia exigua ATCC 700122.;"
biotin carboxylase/acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase, biotin carboxylase subunit n=2 Tax=Slackia RepID=D0WFZ6_9ACTN
H2-18-all-fractions_k255_3292708_15
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11643..13457)
DNA (1815bp) protein (605aa)
Oxaloacetate decarboxylase alpha subunit n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R7W5_AMMDK
pyruvate carboxylase subunit B
Oxaloacetate decarboxylase alpha subunit {ECO:0000313|EMBL:ACX52394.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
H2-18-all-fractions_k255_3292708_16
unknown

Not on your lists

13497..14099
DNA (603bp) protein (201aa)

This feature has no annotations

H2-18-all-fractions_k255_3292708_17
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14114..14680)
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCX9_CONWI
translation elongation factor P
Tax=CG_Solirubrobact_01
H2-18-all-fractions_k255_3292708_18
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14692..15729)
DNA (1038bp) protein (346aa)
Xaa-Pro dipeptidase n=1 Tax=Streptomyces sp. AA4 RepID=D9UZ99_9ACTO
Xaa-Pro dipeptidase {ECO:0000313|EMBL:EFL06571.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
peptidase M24
H2-18-all-fractions_k255_3292708_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15726..16166)
DNA (441bp) protein (147aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
3-dehydroquinate dehydratase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCW6_CONWI
H2-18-all-fractions_k255_3292708_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16178..17560)
DNA (1383bp) protein (461aa)
3-dehydroquinate synthase (EC:2.7.1.71 4.2.3.4)
3-dehydroquinate synthase {ECO:0000313|EMBL:ADB51477.1}; EC=2.7.1.71 {ECO:0000313|EMBL:ADB51477.1};; EC=4.2.3.4 {ECO:0000313|EMBL:ADB51477.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
3-dehydroquinate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCW5_CONWI
H2-18-all-fractions_k255_3292708_21
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17587..18672)
DNA (1086bp) protein (362aa)
Chorismate synthase {ECO:0000255|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000255|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000255|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000255|HAMAP-Rule:MF_00300}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
AroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=AROC_PELTS
H2-18-all-fractions_k255_3292708_22
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(18669..19331)
DNA (663bp) protein (221aa)
shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WXL2_KYRT2
Tax=RBG_16_Actinobacteria_68_21_curated
H2-18-all-fractions_k255_3292708_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(19328..20326)
DNA (999bp) protein (333aa)
Aminodeoxychorismate lyase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCU3_CONWI
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ADB51455.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H2-18-all-fractions_k255_3292708_24
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20305..20688)
DNA (384bp) protein (128aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Putative Holliday junction resolvase n=1 Tax=Patulibacter medicamentivorans RepID=H0EBE3_9ACTN
Holliday junction resolvase YqgF
H2-18-all-fractions_k255_3292708_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(20685..23204)
DNA (2520bp) protein (840aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Alanine--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCU1_CONWI
H2-18-all-fractions_k255_3292708_26
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23225..23947)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036EED79
Methyltransferase type 11 {ECO:0000313|EMBL:EON25107.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
MerR family transcriptional regulator
H2-18-all-fractions_k255_3292708_27
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23944..24714)
DNA (771bp) protein (257aa)
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F264_CONWI
sigma-B/F/G subfamily RNA polymerase sigma-28 factor
Tax=RBG_13_Actinobacteria_63_9_curated
H2-18-all-fractions_k255_3292708_28
unknown

Not on your lists

comp(24711..25100)
DNA (390bp) protein (130aa)

This feature has no annotations

H2-18-all-fractions_k255_3292708_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(25163..26416)
DNA (1254bp) protein (418aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCS6_CONWI
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
H2-18-all-fractions_k255_3292708_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(26688..27113)
DNA (426bp) protein (142aa)
Rare lipoprotein A n=1 Tax=Patulibacter medicamentivorans RepID=H0E412_9ACTN
Rare lipoprotein A
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 32 in total

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