ggKbase | organisms

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.32 Longest contig: 16.40 Kbp Bin length: 3.23 Mbp GC content: 54.57 %

Contigs count: 992 Features count: 3942 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4

Displaying items 701-750 of 992 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
H2-18-all-fractions_k255_412386 Species: Chthoniobacter flavus (50%)	2	3204 bp	55.90	0.28	99.63
H2-18-all-fractions_k255_4423793 Species: R_Nitrospirae_66_17 (50%)	2	1529 bp	55.85	0.20	98.10
H2-18-all-fractions_k255_1526247 Species: Polaromonas sp. JS666 (50%)	2	1908 bp	51.99	0.47	74.69
H2-18-all-fractions_k255_439067 Species: uncultured bacterium (50%)	2	1515 bp	57.62	0.40	99.80
H2-18-all-fractions_k255_3271332 Species: [Clostridium] termitidis (50%)	2	2086 bp	49.28	0.43	91.90
H2-18-all-fractions_k255_2577428 Species: RBG_16_Planctomycetes_64_10_curated (50%)	2	2187 bp	55.46	0.27	94.51
H2-18-all-fractions_k255_4504227 Species: Pedosphaera parvula (50%)	2	1609 bp	54.26	0.19	90.24
H2-18-all-fractions_k255_4508090 Species: Opitutus terrae (50%)	2	1598 bp	53.07	0.19	99.31
H2-18-all-fractions_k255_3697130 Species: Pyrinomonas methylaliphatogenes (100%)	2	1638 bp	52.63	0.27	83.88
H2-18-all-fractions_k255_477370 Species: Bradyrhizobium sp. ORS 285 (50%)	2	1848 bp	58.06	0.57	88.80
H2-18-all-fractions_k255_4518578 Species: Pedosphaera parvula (50%)	2	2003 bp	54.87	0.22	94.96
H2-18-all-fractions_k255_492754 Species: RLO_Verrucomicrobia_64_8 (50%)	2	1566 bp	53.58	0.19	90.23
H2-18-all-fractions_k255_493349 Species: Candidatus Koribacter versatilis (50%)	2	3439 bp	53.94	0.35	94.13
H2-18-all-fractions_k255_2673236 Species: GWC2_Ignavibacteria_rel_36_12_curated (50%)	2	3185 bp	54.51	0.75	92.21
H2-18-all-fractions_k255_2155152 Species: Candidatus Solibacter usitatus (50%)	2	2008 bp	54.53	7.10	93.68
H2-18-all-fractions_k255_2688807 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	1968 bp	54.98	0.91	95.12
H2-18-all-fractions_k255_3757012 Species: RifOxyA12_full_Elusimicrobia_57_11_curated (50%)	2	1543 bp	51.52	0.49	87.69
H2-18-all-fractions_k255_4585903 Species: Chthoniobacter flavus (50%)	2	1749 bp	52.94	0.17	90.39
H2-18-all-fractions_k255_911924 Species: Cecembia lonarensis (50%)	2	1663 bp	54.30	0.81	98.32
H2-18-all-fractions_k255_580435 Species: Parachlamydia acanthamoebae (50%)	2	3377 bp	57.57	0.22	87.50
H2-18-all-fractions_k255_2712904 Species: GWF2_Bacteroidetes_43_11_curated (50%)	2	2278 bp	53.56	0.13	91.92
H2-18-all-fractions_k255_596525 Species: Flavobacterium johnsoniae (50%)	2	1599 bp	55.47	0.38	98.69
H2-18-all-fractions_k255_2732381 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1602 bp	57.43	0.09	97.38
H2-18-all-fractions_k255_4603407 Species: Chthoniobacter flavus (100%)	2	2530 bp	57.11	0.12	96.76
H2-18-all-fractions_k255_3405038 Species: Desulfobacca acetoxidans (50%)	2	1618 bp	53.65	0.46	98.27
H2-18-all-fractions_k255_2747616 Species: Bradyrhizobium japonicum (50%)	2	2116 bp	60.30	1.56	95.98
H2-18-all-fractions_k255_1063389 Species: Desulfovibrio alkalitolerans (50%)	2	1688 bp	52.43	0.36	84.42
H2-18-all-fractions_k255_4642698 Species: R_Omnitrophica_44_11 (50%)	2	1907 bp	55.37	0.16	89.20
H2-18-all-fractions_k255_635553 Species: R_Gammaproteobacteria_42_13 (50%)	2	1736 bp	53.74	0.35	97.81
H2-18-all-fractions_k255_2751725 Species: Rhodopirellula europaea (50%)	2	1676 bp	54.83	0.45	45.64
H2-18-all-fractions_k255_1633546 Species: Singulisphaera acidiphila (50%)	2	1776 bp	50.79	0.17	75.34
H2-18-all-fractions_k255_4662706 Species: Chthoniobacter flavus (100%)	2	1875 bp	54.61	0.72	90.08
H2-18-all-fractions_k255_2758549 Species: Opitutus terrae (50%)	2	2304 bp	56.77	0.52	98.05
H2-18-all-fractions_k255_652058 Species: Massilia sp. JS1662 (50%)	2	1908 bp	56.08	0.47	61.79
H2-18-all-fractions_k255_4673240 Species: uncultured bacterium (50%)	2	1619 bp	53.37	0.19	94.50
H2-18-all-fractions_k255_679727 Species: Pyrinomonas methylaliphatogenes (50%)	2	2532 bp	53.12	0.18	95.97
H2-18-all-fractions_k255_3997726 Species: Methylococcus capsulatus (50%)	2	1645 bp	49.24	0.91	80.97
H2-18-all-fractions_k255_1494518 Species: Mesorhizobium sp. LNHC252B00 (50%)	2	2250 bp	50.31	0.27	63.47
H2-18-all-fractions_k255_4712032 Species: Candidatus Acetothermus autotrophicum (50%)	2	1692 bp	54.55	0.18	96.28
H2-18-all-fractions_k255_732257 Species: uncultured bacterium (100%)	2	1580 bp	54.68	0.28	93.80
H2-18-all-fractions_k255_732723 Species: Chthoniobacter flavus (50%)	2	2334 bp	52.91	0.19	95.37
H2-18-all-fractions_k255_2868660 Species: Chthoniobacter flavus (50%)	2	3255 bp	54.96	0.28	74.47
H2-18-all-fractions_k255_1227980 Species: Pyrinomonas methylaliphatogenes (50%)	2	2332 bp	53.17	0.58	90.69
H2-18-all-fractions_k255_2870098 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)	2	1863 bp	55.88	0.32	98.71
H2-18-all-fractions_k255_4741872 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated (50%)	2	1524 bp	54.40	0.20	99.61
H2-18-all-fractions_k255_4743719 Species: RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated (50%)	2	1565 bp	53.10	0.19	99.87
H2-18-all-fractions_k255_3893670 Species: uncultured planctomycete (100%)	2	1575 bp	54.73	0.95	97.71
H2-18-all-fractions_k255_760294 Species: Chthoniobacter flavus (100%)	2	1880 bp	55.16	0.48	97.18
H2-18-all-fractions_k255_4746645 Species: Chthoniobacter flavus (100%)	2	1822 bp	54.17	0.33	100.11
H2-18-all-fractions_k255_2903790 Species: RBG_16_Planctomycetes_59_8_curated (50%)	2	1839 bp	54.92	0.82	99.67

Displaying items 701-750 of 992 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (H2-18-all-fractions_metab_49) and add all its contigs / scaffolds to the organism you choose below

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Other organism

H2-18-all-fractions_metab_49

wsip-metawrap-drep-bins_Bacteria_55_0

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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