ggKbase | organisms

Consensus taxonomy: Bacteria

Metagenomic Context

Parent: wsip-metawrap-drep-bins_UNK

Properties

Avg. coverage: 0.32 Longest contig: 16.40 Kbp Bin length: 3.23 Mbp GC content: 54.57 %

Contigs count: 992 Features count: 3942 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 40 / 55 MC: 1 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 4

Displaying items 751-800 of 992 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
H2-18-all-fractions_k255_4755036 Species: Thermosediminibacter oceani (50%)	2	2078 bp	53.46	0.79	100.19
H2-18-all-fractions_k255_1645026 Species: Thauera linaloolentis (50%)	2	1685 bp	51.93	0.00	92.58
H2-18-all-fractions_k255_803009 Species: CG_Omnitr_03 (50%)	2	1657 bp	57.03	0.72	36.75
H2-18-all-fractions_k255_2904307 Species: Chthoniobacter flavus (50%)	2	1508 bp	53.12	0.40	83.75
H2-18-all-fractions_k255_3250381 Species: Bdellovibrio bacteriovorus (50%)	2	1717 bp	50.96	0.35	65.00
H2-18-all-fractions_k255_815341 Species: Pyrinomonas methylaliphatogenes (100%)	2	1584 bp	53.22	0.95	95.27
H2-18-all-fractions_k255_846848 Species: GWF2_Lentisphaerae_38_69_curated (50%)	2	1930 bp	57.98	0.39	83.47
H2-18-all-fractions_k255_4897370 Species: Chthoniobacter flavus (100%)	2	1755 bp	55.50	0.00	94.19
H2-18-all-fractions_k255_916148 Species: Neochlamydia sp. EPS4 (50%)	2	2917 bp	54.13	0.62	96.67
H2-18-all-fractions_k255_3166336 Species: Paenibacillus riograndensis (50%)	2	1776 bp	49.38	0.34	99.83
H2-18-all-fractions_k255_5480101 Species: Pyrinomonas methylaliphatogenes (100%)	2	1580 bp	53.61	0.19	78.61
H2-18-all-fractions_k255_975293 Species: Xenococcus sp. PCC 7305 (50%)	2	1620 bp	55.37	0.93	58.33
H2-18-all-fractions_k255_4921693 Species: Chthoniobacter flavus (100%)	2	2976 bp	54.87	0.40	96.77
H2-18-all-fractions_k255_5399007 Species: Pseudanabaena biceps (50%)	2	1625 bp	53.35	0.18	102.28
H2-18-all-fractions_k255_980492 Species: Chthoniobacter flavus (100%)	2	1756 bp	54.27	0.26	93.45
H2-18-all-fractions_k255_45459	2	1678 bp	55.30	0.00	95.65
H2-18-all-fractions_k255_3051713 Species: Geobacter pickeringii (50%)	2	2138 bp	57.72	0.07	78.44
H2-18-all-fractions_k255_4959824 Species: Chthoniobacter flavus (100%)	2	5914 bp	53.77	0.51	96.99
H2-18-all-fractions_k255_75377 Species: RBG_16_Deltaproteobacteria_47_11_curated (50%)	2	2314 bp	52.81	1.49	78.95
H2-18-all-fractions_k255_763998 Species: Pyrinomonas methylaliphatogenes (100%)	2	1589 bp	54.88	0.57	85.15
H2-18-all-fractions_k255_943521 Species: Pyrinomonas methylaliphatogenes (50%)	2	1649 bp	56.46	0.36	99.51
H2-18-all-fractions_k255_1039942 Species: Chthoniobacter flavus (50%)	2	2417 bp	54.82	0.37	96.69
H2-18-all-fractions_k255_5014736 Species: Rhodopirellula baltica (50%)	2	1630 bp	59.26	1.10	85.40
H2-18-all-fractions_k255_1068655 Species: Ktedonobacter racemifer (100%)	2	1974 bp	53.19	0.61	90.88
H2-18-all-fractions_k255_3620043 Species: Sclerotinia sclerotiorum (100%)	2	2744 bp	34.91	4.59	86.48
H2-18-all-fractions_k255_5028637 Species: Chthoniobacter flavus (50%)	2	1760 bp	54.37	0.00	96.31
H2-18-all-fractions_k255_4059534 Species: Ktedonobacter racemifer (100%)	2	1582 bp	50.06	0.19	66.37
H2-18-all-fractions_k255_1100260 Species: GWB2_Nitrospirae_47_37_curated (50%)	2	1969 bp	57.03	0.00	91.26
H2-18-all-fractions_k255_324804 Species: Streptomyces sp. 150FB (50%)	2	1897 bp	52.77	0.32	99.16
H2-18-all-fractions_k255_3123237 Species: RHI_Verrucumicrobia_41_10 (50%)	2	3011 bp	54.83	0.40	98.24
H2-18-all-fractions_k255_846934 Species: Chloracidobacterium thermophilum (50%)	2	2399 bp	56.02	0.44	98.92
H2-18-all-fractions_k255_1603958 Species: R_Acidobacteria_65_29 (50%)	2	1774 bp	60.99	2.11	63.25
H2-18-all-fractions_k255_159641 Species: Pyrinomonas methylaliphatogenes (100%)	2	1673 bp	56.96	0.00	93.60
H2-18-all-fractions_k255_1165685 Species: Opitutus terrae (50%)	2	2648 bp	54.46	0.23	96.30
H2-18-all-fractions_k255_5114771 Species: Singulisphaera acidiphila (50%)	2	2531 bp	56.70	0.12	86.41
H2-18-all-fractions_k255_1175724 Species: Pyrinomonas methylaliphatogenes (50%)	2	2485 bp	58.23	0.60	92.47
H2-18-all-fractions_k255_3157337 Species: RHI_Verrucumicrobia_41_10 (50%)	2	1947 bp	54.80	0.00	95.22
H2-18-all-fractions_k255_3193544 Species: Rhodopirellula sp. SWK7 (50%)	2	2195 bp	55.31	0.14	91.57
H2-18-all-fractions_k255_4946443 Species: Cystobacter violaceus (50%)	2	1964 bp	55.45	0.46	87.53
H2-18-all-fractions_k255_5144145 Species: Candidatus Solibacter usitatus (50%)	2	1781 bp	56.65	0.51	89.61
H2-18-all-fractions_k255_1259093 Species: Methanolobus psychrophilus (50%)	2	4088 bp	56.58	0.33	92.03
H2-18-all-fractions_k255_213725 Species: Chloroherpeton thalassium (50%)	2	1580 bp	53.61	0.57	92.66
H2-18-all-fractions_k255_671708 Species: marine sediment metagenome (50%)	2	1762 bp	56.13	1.28	95.52
H2-18-all-fractions_k255_3240170 Species: uncultured bacterium (50%)	2	2363 bp	56.20	0.06	99.53
H2-18-all-fractions_k255_1305588 Species: RIFOXYD12_FULL_Rhodospirillales_60_8_curated (50%)	2	1688 bp	55.09	0.18	83.18
H2-18-all-fractions_k255_3240730 Species: Opitutaceae bacterium TAV1 (100%)	2	1578 bp	55.01	0.00	96.58
H2-18-all-fractions_k255_5270457 Species: Gemmatimonadetes bacterium KBS708 (50%)	2	2933 bp	52.98	0.31	96.86
H2-18-all-fractions_k255_3543378 Species: Pyrinomonas methylaliphatogenes (50%)	2	1874 bp	52.88	0.56	77.64
H2-18-all-fractions_k255_4689280 Species: Pyrinomonas methylaliphatogenes (100%)	2	2277 bp	51.47	0.26	98.29
H2-18-all-fractions_k255_3284749 Species: BJP_08E140C01_Xanthomonadales_64_42 (50%)	2	2346 bp	55.12	0.38	97.83

Displaying items 751-800 of 992 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

Warning! This will delete the current organism (H2-18-all-fractions_metab_49) and add all its contigs / scaffolds to the organism you choose below

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Other organism

H2-18-all-fractions_metab_49

wsip-metawrap-drep-bins_Bacteria_55_0

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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