ggKbase home page

H2-18-all-fractions_k255_1128261

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_1128261_1
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(603..920)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YG24_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS39610.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
H2-18-all-fractions_k255_1128261_2
uncultured Acidobacteriales bacterium HF0200_23L05, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(931..1419)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteriales bacterium HF0200_23L05 RepID=E0XUJ8_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADI18089.1}; TaxID=710732 species="Bacteria; Acidobacteria; Acidobacteriales; environmental samples.;" source="uncultured Acidobacteriales bacterium HF0200_23L05.;"
H2-18-all-fractions_k255_1128261_3
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1429..3420)
DNA (1992bp) protein (664aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XPW0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EMS39608.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
thiamine pyrophosphate protein
H2-18-all-fractions_k255_1128261_4
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3593..4516
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XY4_RHOFD
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
H2-18-all-fractions_k255_1128261_5
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4715..5854
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031B2239
Uncharacterized protein {ECO:0000313|EMBL:EKU81847.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
H2-18-all-fractions_k255_1128261_6
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5991..7247
DNA (1257bp) protein (419aa)
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Polaromonas sp. CF318 RepID=J2KZY5_9BURK
beta-lactamase
Tax=GWC2_Geobacteraceae_53_11_curated
H2-18-all-fractions_k255_1128261_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7278..7970)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=B7WUA9_COMTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ48930.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
H2-18-all-fractions_k255_1128261_8
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8204..9769
DNA (1566bp) protein (522aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Pseudomonas fluorescens F113 RepID=G8PWE7_PSEFL
Diguanylate cyclase {ECO:0000313|EMBL:EWG99223.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
dGTP triphosphohydrolase
H2-18-all-fractions_k255_1128261_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9766..10044)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D5U7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF82932.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_1128261_10
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

10200..10766
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TFW6_RICCO
Putative uncharacterized protein {ECO:0000313|EMBL:EEF25247.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
hypothetical protein
H2-18-all-fractions_k255_1128261_11
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10745..11779)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0ARU7_BURTH
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
H2-18-all-fractions_k255_1128261_12
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11795..12286)
DNA (492bp) protein (164aa)
Universal stress protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2L4M5_9BURK
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
uspA; Universal stress protein
H2-18-all-fractions_k255_1128261_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12458..12907
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037BD49B
heat shock protein Hsp20
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
H2-18-all-fractions_k255_1128261_14
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13020..13700)
DNA (681bp) protein (227aa)
Isochorismatase {ECO:0000313|EMBL:KFC76214.1}; EC=3.3.2.1 {ECO:0000313|EMBL:KFC76214.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003683E89
isochorismatase hydrolase
H2-18-all-fractions_k255_1128261_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13813..15195
DNA (1383bp) protein (461aa)
pncB1; nicotinate phosphoribosyltransferase PncB (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Variovorax paradoxus B4 RepID=T1XLI0_VARPD
H2-18-all-fractions_k255_1128261_16
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15290..16270
DNA (981bp) protein (327aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A53A5
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KIF80102.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
H2-18-all-fractions_k255_1128261_17
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16278..18134
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E8ADEC
Glycosyl transferase {ECO:0000313|EMBL:KIF83526.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
glycosyl transferase family protein
H2-18-all-fractions_k255_1128261_18
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(18131..18835)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TJ87_RICCO
Putative uncharacterized protein {ECO:0000313|EMBL:EEF24078.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
hypothetical protein
H2-18-all-fractions_k255_1128261_19
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19032..20273)
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036E5288
Uncharacterized protein {ECO:0000313|EMBL:EKU82003.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
conserved hypothetical protein
H2-18-all-fractions_k255_1128261_20
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20448..22043
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037F3E08
PAS domain S-box protein {ECO:0000313|EMBL:KFC74230.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
aer; aerotaxis sensor receptor (chemotaxis transducer) transmembrane protein
H2-18-all-fractions_k255_1128261_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22153..23595
DNA (1443bp) protein (481aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hemNA; coproporphyrinogen dehydrogenase (EC:1.3.99.22)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000362F6ED
H2-18-all-fractions_k255_1128261_22
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23603..24364
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003682D06
Membrane copper tolerance protein {ECO:0000313|EMBL:KFC74232.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H2-18-all-fractions_k255_1128261_23
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24361..26760
DNA (2400bp) protein (800aa)
cation-translocating P-type ATPase (EC:3.6.1.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000366541B
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKU82007.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
H2-18-all-fractions_k255_1128261_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26763..26909
DNA (147bp) protein (49aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036DE3CF
Cytochrome oxidase maturation protein Cbb3 {ECO:0000313|EMBL:KGF78509.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
fixS; nitrogen fixation protein
H2-18-all-fractions_k255_1128261_25
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26936..27334)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DBF4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82009.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
DnaK suppressor protein
H2-18-all-fractions_k255_1128261_26
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27469..28626
DNA (1158bp) protein (386aa)
ccoN; cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1)
cytochrome oxidase subunit I n=1 Tax=Massilia niastensis RepID=UPI00037747FF
Cbb3-type cytochrome c oxidase subunit I {ECO:0000313|EMBL:KGF78511.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Displaying 26 items

View Taxonomy