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H2-18-all-fractions_k255_1612933

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_1612933_1
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..232)
DNA (231bp) protein (77aa)
pseudouridylate synthase (EC:4.2.1.70)
RNA pseudouridylate synthase n=1 Tax=uncultured organism RepID=T1W5X5_9ZZZZ
Pseudouridine synthase {ECO:0000313|EMBL:EKU81942.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
H2-18-all-fractions_k255_1612933_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(266..2845)
DNA (2580bp) protein (860aa)
glnD; protein-P-II uridylyltransferase (EC:2.7.7.59)
PII uridylyl-transferase n=1 Tax=Massilia niastensis RepID=UPI000372AD5F
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_1612933_3
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2847..3671)
DNA (825bp) protein (275aa)
map2; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
Methionine aminopeptidase n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZQ2_JANMA
H2-18-all-fractions_k255_1612933_4
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4029..4778
DNA (750bp) protein (250aa)
30S ribosomal protein S2 n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DXH6_9BURK
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
rpsB; ribosomal protein S2
H2-18-all-fractions_k255_1612933_5
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4922..5830
DNA (909bp) protein (303aa)
Elongation factor Ts n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DFA7_9BURK
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
tsf; translation elongation factor Ts
H2-18-all-fractions_k255_1612933_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6126..6842
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pyrH; UMP kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DTE0_9BURK
H2-18-all-fractions_k255_1612933_7
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6922..7482
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=2 Tax=Oxalobacteraceae RepID=L9PCN8_9BURK
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
frr; ribosome recycling factor
H2-18-all-fractions_k255_1612933_8

Not on your lists

7612..8364
DNA (753bp) protein (251aa)
uppS; di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
UDP diphosphate synthase n=1 Tax=Massilia niastensis RepID=UPI0003791A58
Putative undecaprenyl diphosphate synthase {ECO:0000313|EMBL:AGU10102.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
H2-18-all-fractions_k255_1612933_9
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8364..9194
DNA (831bp) protein (277aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035FC725
cytidylyltransferase family protein
H2-18-all-fractions_k255_1612933_10
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9207..10379
DNA (1173bp) protein (391aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036A90FF
H2-18-all-fractions_k255_1612933_11
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10405..11742
DNA (1338bp) protein (446aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
rseP; RIP metalloprotease RseP (EC:3.4.24.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037FEE12
H2-18-all-fractions_k255_1612933_12
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11808..14144
DNA (2337bp) protein (779aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003767FA9
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
yaeT; outer membrane assembly complex, YaeT protein
H2-18-all-fractions_k255_1612933_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14186..14707
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DBA7_9BURK
Membrane protein {ECO:0000313|EMBL:KGF83163.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
outer membrane chaperone Skp
H2-18-all-fractions_k255_1612933_14
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14867..15916
DNA (1050bp) protein (350aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Massilia niastensis RepID=UPI00035F6AD3
H2-18-all-fractions_k255_1612933_15
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15913..16398
DNA (486bp) protein (162aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-ACP dehydratase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034BE853
H2-18-all-fractions_k255_1612933_16

Not on your lists

16398..17186
DNA (789bp) protein (263aa)
lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
UDP-N-acetylglucosamine acyltransferase n=1 Tax=Massilia niastensis RepID=UPI00035DEB02
Udp N-acetylglucosamine O-acyltransferase {ECO:0000313|EMBL:AGU10094.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
H2-18-all-fractions_k255_1612933_17
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17170..18330
DNA (1161bp) protein (387aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003617E08
H2-18-all-fractions_k255_1612933_18
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18327..18989
DNA (663bp) protein (221aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037D5EAD
H2-18-all-fractions_k255_1612933_19
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18986..19771
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003759C1E
spoU rRNA Methylase family protein
SpoU rRNA Methylase family protein {ECO:0000313|EMBL:CDG83417.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H2-18-all-fractions_k255_1612933_20
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19824..21020
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003717FFC
Putative oxygen sensor protein {ECO:0000313|EMBL:KFC75862.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
response regulator
H2-18-all-fractions_k255_1612933_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21233..22078)
DNA (846bp) protein (282aa)
Putative phosphoenolpyruvate synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; Short=PEP synthase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062};; Short=PSRP {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.11.33 {ECO:0000256|HAMAP-Rule:MF_01062};; EC=2.7.4.28 {ECO:0000256|HAMAP-Rule:MF_01062};; Pyruvate, water dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_01062}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
Putative phosphoenolpyruvate synthase regulatory protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DBV9_9BURK
conserved hypothetical protein
H2-18-all-fractions_k255_1612933_22
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22259..24697
DNA (2439bp) protein (813aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PBU2_9BURK
H2-18-all-fractions_k255_1612933_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24959..25381
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003816040
NfeD family protein {ECO:0000313|EMBL:KGF83174.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
nfeD-like family protein
H2-18-all-fractions_k255_1612933_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25409..26329
DNA (921bp) protein (307aa)
stomatin 2 n=1 Tax=Duganella zoogloeoides RepID=UPI0003744822
Stomatin 2 {ECO:0000313|EMBL:KGF83175.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
stomatin/Mec-2 family protein
H2-18-all-fractions_k255_1612933_25
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26326..27135
DNA (810bp) protein (270aa)
11-beta-hydroxysteroid dehydrogenase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PL75_9BURK
11-beta-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:KFC61385.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
short chain dehydrogenase
H2-18-all-fractions_k255_1612933_26
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27169..27531
DNA (363bp) protein (121aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TQW0_RICCO
Uncharacterized protein {ECO:0000313|EMBL:KFC68360.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
H2-18-all-fractions_k255_1612933_27
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27592..28257
DNA (666bp) protein (222aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
lepB2; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AAE0_COLFT
H2-18-all-fractions_k255_1612933_28
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28292..29410)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035DDC4E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06690.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
H2-18-all-fractions_k255_1612933_29

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29595..30785
DNA (1191bp) protein (397aa)
Putitive MFS transporter n=1 Tax=uncultured bacterium RepID=F8UVP5_9BACT
Putitive MFS transporter {ECO:0000313|EMBL:AEI30163.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
drug resistance transporter, Bcr/CflA subfamily protein
H2-18-all-fractions_k255_1612933_30
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30855..31304)
DNA (450bp) protein (150aa)
single-stranded DNA-binding protein n=1 Tax=Massilia niastensis RepID=UPI0003601392
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
smpB; ssrA-binding protein
Displaying items 1-30 of 69 in total

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