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H2-18-all-fractions_k255_2351608

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_2351608_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..765)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003671BEB
Uncharacterized protein {ECO:0000313|EMBL:KGF83488.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
phosphatase/phosphotransferase; cellobiase
H2-18-all-fractions_k255_2351608_2
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(782..2203)
DNA (1422bp) protein (474aa)
radical SAM protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E0FF1D
radical SAM superfamily protein
Radical SAM superfamily protein {ECO:0000313|EMBL:AIO68028.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
H2-18-all-fractions_k255_2351608_3
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2243..3367)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D29413
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:AAZ64248.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
H2-18-all-fractions_k255_2351608_4
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3376..4530)
DNA (1155bp) protein (385aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
radical SAM protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00035DF382
Fe-S oxidoreductase {ECO:0000313|EMBL:AEI81104.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
H2-18-all-fractions_k255_2351608_5
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4543..5505)
DNA (963bp) protein (321aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031B109E
H2-18-all-fractions_k255_2351608_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5620..6621
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003148487
NAD-dependent dehydratase {ECO:0000313|EMBL:KGF83485.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
dihydroflavonol-4-reductase
H2-18-all-fractions_k255_2351608_7
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6614..7576)
DNA (963bp) protein (321aa)
Putative metal-dependent hydrolase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PL94_9BURK
Putative metal-dependent hydrolase {ECO:0000313|EMBL:ELX12372.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
metal-dependent protein hydrolase
H2-18-all-fractions_k255_2351608_8
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7719..8921)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030A7A59
Glycosyl transferase family 2 {ECO:0000313|EMBL:KEA59346.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
glycosyl transferase 2 family protein
H2-18-all-fractions_k255_2351608_9
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8931..9923)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DBECE3
Uncharacterized protein {ECO:0000313|EMBL:KHD21202.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
hypothetical protein
H2-18-all-fractions_k255_2351608_10
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10193..11020
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035F3E1E
Uncharacterized protein {ECO:0000313|EMBL:KFI06475.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein
H2-18-all-fractions_k255_2351608_11
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11047..12660
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003634324
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EER58821.1}; Flags: Precursor; Fragment;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
H2-18-all-fractions_k255_2351608_12
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12981..15167
DNA (2187bp) protein (729aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036E06E7
Alpha-galactosidase {ECO:0000313|EMBL:KFC71529.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H2-18-all-fractions_k255_2351608_13
unknown

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comp(15211..15705)
DNA (495bp) protein (165aa)

This feature has no annotations

H2-18-all-fractions_k255_2351608_14
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16022..18829)
DNA (2808bp) protein (936aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
ppc; phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D7A1_9BURK
H2-18-all-fractions_k255_2351608_15
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18986..19951
DNA (966bp) protein (322aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DT23_9BURK
H2-18-all-fractions_k255_2351608_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19944..20714
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003708A2F
Uroporphyrinogen III synthase {ECO:0000313|EMBL:KGF80025.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
uroporphyrinogen-III synthase HemD family protein
H2-18-all-fractions_k255_2351608_17
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20711..21865
DNA (1155bp) protein (385aa)
Uroporphyrin-III C-methyltransferase HemX {ECO:0000313|EMBL:KFC71524.1}; EC=2.1.1.107 {ECO:0000313|EMBL:KFC71524.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003610F18
hemX family protein
H2-18-all-fractions_k255_2351608_18
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21869..23065
DNA (1197bp) protein (399aa)
porphyrin biosynthesis protein n=1 Tax=Massilia niastensis RepID=UPI00037AE6BF
HemY domain-containing-protein {ECO:0000313|EMBL:KFC71523.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hemY N-terminus family protein
H2-18-all-fractions_k255_2351608_19
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23316..23852
DNA (537bp) protein (179aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
inorganic pyrophosphatase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000372BBFB
H2-18-all-fractions_k255_2351608_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24067..25503)
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000365D073
Peptidase {ECO:0000313|EMBL:KGF80020.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
PA domain protein
H2-18-all-fractions_k255_2351608_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25490..25894)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037AFF80
Uncharacterized protein {ECO:0000313|EMBL:KFC71520.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
PEP-CTERM putative exosortase interaction domain protein
H2-18-all-fractions_k255_2351608_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25920..26636)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DT31_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF80018.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
PEP-CTERM putative exosortase interaction domain protein
H2-18-all-fractions_k255_2351608_23
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26866..27291)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037D3AF3
Uncharacterized protein {ECO:0000313|EMBL:EKU80540.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
inner-membrane translocator
Displaying 23 items

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