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H2-18-all-fractions_k255_3260186

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_3260186_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..874
DNA (873bp) protein (291aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glyA2; serine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase n=1 Tax=Massilia niastensis RepID=UPI00035F2423
H2-18-all-fractions_k255_3260186_2
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

940..1398
DNA (459bp) protein (153aa)
NrdR family transcriptional regulator n=1 Tax=Massilia niastensis RepID=UPI0003610CFF
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
transcription regulator protein
H2-18-all-fractions_k255_3260186_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1555..2088
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D26DD
Type IV pilus modification protein PilV {ECO:0000313|EMBL:KFC63260.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
pilV; type IV pilus modification protein PilV
H2-18-all-fractions_k255_3260186_4
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2085..3053
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003601E7A
Uncharacterized protein {ECO:0000313|EMBL:KFI08619.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
pilW1; pilW type IV pilus assembly protein
H2-18-all-fractions_k255_3260186_5
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3050..4201
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031B2239
Uncharacterized protein {ECO:0000313|EMBL:KIF81493.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
H2-18-all-fractions_k255_3260186_6
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4198..4890
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003789CFB
Tfp pilus assembly protein PilX {ECO:0000313|EMBL:KFC63262.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative transmembrane protein
H2-18-all-fractions_k255_3260186_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4887..5333
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003626926
Pilus assembly protein PilE {ECO:0000313|EMBL:KGF79732.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
prepilin-type N-terminal cleavage/methylation domain protein
H2-18-all-fractions_k255_3260186_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5330..5884
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D5X1_9BURK
Type IV pilus assembly protein FimT {ECO:0000313|EMBL:KFC63264.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
prepilin-type N-terminal cleavage/methylation domain protein
H2-18-all-fractions_k255_3260186_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5952..7028
DNA (1077bp) protein (359aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26)
diaminohydroxyphosphoribosylaminopyrimidine deaminase n=1 Tax=Massilia niastensis RepID=UPI000361F13F
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_3260186_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7035..7652
DNA (618bp) protein (206aa)
ribE; riboflavin synthase subunit alpha (EC:2.5.1.9)
riboflavin synthase subunit alpha n=1 Tax=Massilia niastensis RepID=UPI00038041D1
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:KGF79735.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_3260186_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7845..9800
DNA (1956bp) protein (652aa)
peptidase S9, prolyl oligopeptidase n=1 Tax=Janthinobacterium lividum RepID=UPI000289D2C1
Peptidase S9 {ECO:0000313|EMBL:KGF79736.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
peptidase S9
H2-18-all-fractions_k255_3260186_12
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10059..12905)
DNA (2847bp) protein (949aa)
Zinc protease PqqL {ECO:0000313|EMBL:KFC63267.1}; EC=3.4.24.- {ECO:0000313|EMBL:KFC63267.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037C47C9
insulinase family protein
H2-18-all-fractions_k255_3260186_13
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13035..15746)
DNA (2712bp) protein (904aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037F858A
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKU79686.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
H2-18-all-fractions_k255_3260186_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16074..17186
DNA (1113bp) protein (371aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:KGF79737.1}; EC=4.1.99.12 {ECO:0000313|EMBL:KGF79737.1};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DLL4_9BURK
ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase
H2-18-all-fractions_k255_3260186_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17251..17730
DNA (480bp) protein (160aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036C9F0F
H2-18-all-fractions_k255_3260186_16
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17750..18220
DNA (471bp) protein (157aa)
transcription antitermination protein NusB n=1 Tax=Massilia niastensis RepID=UPI000373C4C5
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
nusB; transcription antitermination factor NusB
H2-18-all-fractions_k255_3260186_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18638..19549)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DQN0_9BURK
Membrane protein {ECO:0000313|EMBL:KGF79740.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
transglycosylase SLT domain protein
H2-18-all-fractions_k255_3260186_18
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20018..21502
DNA (1485bp) protein (495aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl p-hydroxybenzoate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01636}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
ubiD; ubiD decarboxylases family protein (EC:4.1.1.-)
3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Massilia niastensis RepID=UPI000378CAD5
H2-18-all-fractions_k255_3260186_19
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21558..22253
DNA (696bp) protein (232aa)
Putative intracellular protease/amidase n=1 Tax=Pseudomonas sp. G5(2012) RepID=S2F4C2_9PSED
dimethylallyltransferase
Dimethylallyltransferase {ECO:0000313|EMBL:KEX90473.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
H2-18-all-fractions_k255_3260186_20
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22812..23957
DNA (1146bp) protein (382aa)
dnaX; DNA polymerase III subunit gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau (Fragment) n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DLL8_9BURK
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EKU79692.1}; Flags: Fragment;; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
Displaying 20 items

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