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H2-18-all-fractions_k255_3782386

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_3782386_1
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..365
DNA (363bp) protein (121aa)
transcriptional regulator n=1 Tax=Massilia niastensis RepID=UPI00037D07D9
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
ihfA; integration host factor alpha-subunit
H2-18-all-fractions_k255_3782386_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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376..789
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DT97_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF83125.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
merR regulatory family protein
H2-18-all-fractions_k255_3782386_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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932..1564
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCG5_9BURK
LuxR family transcriptional regulator {ECO:0000313|EMBL:KGF83126.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
response regulator
H2-18-all-fractions_k255_3782386_4
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1727..3286
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003623A41
Major facilitator superfamily transporter {ECO:0000313|EMBL:KFC75799.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
H2-18-all-fractions_k255_3782386_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3186..3995)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DXE6_9BURK
Protein kinase {ECO:0000313|EMBL:KGF83127.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cyclic nucleotide-binding domain protein
H2-18-all-fractions_k255_3782386_6
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4255..4920
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000375FA63
DNA-binding response regulator {ECO:0000313|EMBL:ELX09166.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
response regulator
H2-18-all-fractions_k255_3782386_7
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4917..6236
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000379E581
HAMP domain protein
H2-18-all-fractions_k255_3782386_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6298..9621)
DNA (3324bp) protein (1108aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030D1166
Type IV fimbrial biogenesis protein PilY1 {ECO:0000313|EMBL:KFC75803.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
H2-18-all-fractions_k255_3782386_9
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9636..10205)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037B7EFE
Uncharacterized protein {ECO:0000313|EMBL:KFI08224.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
transmembrane protein
H2-18-all-fractions_k255_3782386_10
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10202..11272)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D82B04
Uncharacterized protein {ECO:0000313|EMBL:KFI08225.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
type 4 fimbrial biogenesis PilW-related protein transmembrane
H2-18-all-fractions_k255_3782386_11
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11286..11873)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E039C8
Type IV fimbrial biogenesis protein PilV {ECO:0000313|EMBL:KFC75806.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative type 4 fimbrial biogenesis transmembrane protein
H2-18-all-fractions_k255_3782386_12
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11876..12349)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F3A76A
Uncharacterized protein {ECO:0000313|EMBL:KFI08227.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
general secretion pathway protein H
H2-18-all-fractions_k255_3782386_13
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12343..12690)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E5DF7F
Type IV pilus biogenesis protein PilE {ECO:0000313|EMBL:KFC75808.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
pilE2; type 4 fimbrial biogenesis transmembrane protein
H2-18-all-fractions_k255_3782386_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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13002..15407
DNA (2406bp) protein (802aa)
Uncharacterized protein id=3900726 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
glycosyl hydrolase
Glycosyl hydrolase {ECO:0000313|EMBL:ABJ84196.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 14 items

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