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H2-18-all-fractions_k255_4397498

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_4397498_1
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..749
DNA (747bp) protein (249aa)
Putative Xre family transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4Q3_9SPHN
putative Xre family transcriptional regulator
Putative Xre family transcriptional regulator {ECO:0000313|EMBL:AGH51005.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
H2-18-all-fractions_k255_4397498_2
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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823..1647
DNA (825bp) protein (275aa)
Uncharacterized protein n=3 Tax=Sphingomonas wittichii RepID=A5VEX9_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:KKC27790.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
H2-18-all-fractions_k255_4397498_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1457..3811)
DNA (2355bp) protein (785aa)
mrcA; mrcA; penicillin-binding 1 (Peptidoglycan synthetase) transmembrane protein (EC:2.4.2.-)
penicillin-binding protein 1A n=1 Tax=Massilia niastensis RepID=UPI00037678B6
Penicillin-binding protein {ECO:0000313|EMBL:KGF78852.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_4397498_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4135..5211
DNA (1077bp) protein (359aa)
fimbrial assembly protein n=1 Tax=Massilia niastensis RepID=UPI0003749355
Pilus assembly protein PilM {ECO:0000313|EMBL:KGF78851.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
membrane protein ComM
H2-18-all-fractions_k255_4397498_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5211..5849
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035F437B
Fimbrial assembly protein {ECO:0000313|EMBL:KGF78850.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
fimbrial assembly family protein
H2-18-all-fractions_k255_4397498_6
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5846..6532
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003633D96
Uncharacterized protein {ECO:0000313|EMBL:EKU84221.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
pilus assembly , PilO family protein
H2-18-all-fractions_k255_4397498_7
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6529..7071
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037E69EA
Pilus assembly protein PilP {ECO:0000313|EMBL:KFI08028.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
pilus assembly , PilP family protein
H2-18-all-fractions_k255_4397498_8
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7068..9245
DNA (2178bp) protein (726aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003761BD7
Type IV pilus secretin PilQ {ECO:0000313|EMBL:KFC73605.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
pilQ; type IV pilus secretin PilQ family protein
H2-18-all-fractions_k255_4397498_9
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9287..11221
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E000_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFI08026.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
bacterial Ig-like domain family protein
H2-18-all-fractions_k255_4397498_10
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11293..12945
DNA (1653bp) protein (551aa)
aroB-aroK; bifunctional 3-dehydroquinate synthase/shikimate kinase (EC:2.7.1.71 4.2.3.4)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000363258C
3-dehydroquinate synthase {ECO:0000313|EMBL:KFC73603.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
H2-18-all-fractions_k255_4397498_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12942..14081
DNA (1140bp) protein (380aa)
dgt; deoxyguanosinetriphosphate triphosphohydrolase, family protein (EC:3.1.5.1)
deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Massilia niastensis RepID=UPI000375E48E
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_4397498_12
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14240..15343)
DNA (1104bp) protein (368aa)
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037E71D0
A/G-specific adenine glycosylase {ECO:0000313|EMBL:KFC73601.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
H2-18-all-fractions_k255_4397498_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15340..17265)
DNA (1926bp) protein (642aa)
GTPase (EC:3.6.1.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003822002
GTPase {ECO:0000313|EMBL:KGF78841.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_4397498_14
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17288..18121)
DNA (834bp) protein (278aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
mutM; formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003778422
H2-18-all-fractions_k255_4397498_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18221..20005
DNA (1785bp) protein (595aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000378DD81
Uncharacterized protein {ECO:0000313|EMBL:KGF78839.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
tetratricopeptide repeat family protein
H2-18-all-fractions_k255_4397498_16
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20128..20724
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003604A6C
Outer-membrane lipoprotein LolB {ECO:0000256|SAAS:SAAS00002103}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
outer membrane lipoLolB family protein
H2-18-all-fractions_k255_4397498_17
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20726..21631
DNA (906bp) protein (302aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003809F0B
H2-18-all-fractions_k255_4397498_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21923..22873
DNA (951bp) protein (317aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E458_9BURK
H2-18-all-fractions_k255_4397498_19
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


23067..23672
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035C8DFC
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
ribosomal protein L25, Ctc-form
H2-18-all-fractions_k255_4397498_20
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23868..24452
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIT2_9BURK
H2-18-all-fractions_k255_4397498_21
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24454..26307)
DNA (1854bp) protein (618aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003471C89
Uncharacterized protein {ECO:0000313|EMBL:EKU84202.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
H2-18-all-fractions_k255_4397498_22
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26624..27577
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DGP7_9BURK
Transcriptional regulator LysR family protein {ECO:0000313|EMBL:KFC61451.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
LysR family transcriptional regulator
H2-18-all-fractions_k255_4397498_23
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27593..28399)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCR6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82449.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
enoyl-CoA hydratase
H2-18-all-fractions_k255_4397498_24
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28401..29021)
DNA (621bp) protein (207aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DZ16_9BURK
H2-18-all-fractions_k255_4397498_25
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29018..29770)
DNA (753bp) protein (251aa)
UbiD family decarboxylase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DGP9_9BURK
UbiD family decarboxylase {ECO:0000313|EMBL:KFC61456.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
UbiD family decarboxylase
Displaying 25 items

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