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H2-18-all-fractions_k255_5193110

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_5193110_1
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75..764)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036A75F6
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
secD; -export membrane protein SecD
H2-18-all-fractions_k255_5193110_2
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(789..1121)
DNA (333bp) protein (111aa)
Preprotein translocase, YajC subunit n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DFN4_9BURK
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KFI06169.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
yajC; preprotein translocase transmembrane protein
H2-18-all-fractions_k255_5193110_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1358..2497)
DNA (1140bp) protein (380aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
queuine tRNA-ribosyltransferase n=1 Tax=Massilia niastensis RepID=UPI0003697E96
H2-18-all-fractions_k255_5193110_4
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2507..3538)
DNA (1032bp) protein (344aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Massilia niastensis RepID=UPI000382E211
H2-18-all-fractions_k255_5193110_5
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3635..5695
DNA (2061bp) protein (687aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Massilia niastensis RepID=UPI000365DDEF
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EKU83501.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
H2-18-all-fractions_k255_5193110_6
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5782..6531
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DH01_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFI06176.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein
H2-18-all-fractions_k255_5193110_7
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6532..7533)
DNA (1002bp) protein (334aa)
oxidoreductase-like protein (EC:1.1.1.18)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036EB361
Oxidoreductase domain protein {ECO:0000313|EMBL:KFC67019.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
H2-18-all-fractions_k255_5193110_8
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7549..7890)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PFP9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX09678.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
H2-18-all-fractions_k255_5193110_9
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7969..8775)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003661311
Membrane protein {ECO:0000313|EMBL:KFI06180.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
putative transmembrane protein
H2-18-all-fractions_k255_5193110_10
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8782..9831)
DNA (1050bp) protein (350aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
pyrC; dihydroorotase, homodimeric type (EC:3.5.2.3)
dihydroorotase n=1 Tax=Massilia niastensis RepID=UPI00036C4704
H2-18-all-fractions_k255_5193110_11
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10016..10297
DNA (282bp) protein (94aa)
flagellar protein FlgA n=1 Tax=Massilia niastensis RepID=UPI00036E59A5
SAF domain-containing protein
Tax=BJP_IG2103_Rhodocyclales_63_50
H2-18-all-fractions_k255_5193110_12
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10338..11507
DNA (1170bp) protein (390aa)
altronate dehydratase (EC:4.2.1.7)
D-galactarate dehydratase n=1 Tax=Variovorax paradoxus RepID=UPI0003642788
Tax=BJP_IG2103_Rhodocyclales_63_50
H2-18-all-fractions_k255_5193110_13

Not on your lists

comp(11656..12558)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037713E7
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CBH98874.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Transcriptional regulator
H2-18-all-fractions_k255_5193110_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12711..13424
DNA (714bp) protein (238aa)
frdB; fumarate reductase iron-sulfur protein FrdB (EC:1.3.5.1 1.3.99.1)
Succinate dehydrogenase/fumarate reductase Fe-S protein subunit n=1 Tax=Herminiimonas arsenicoxydans RepID=A4GA96_HERAR
Tax=CG_Rhodocyc_01
H2-18-all-fractions_k255_5193110_15
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13421..13765
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037D5540
Succinate dehydrogenase {ECO:0000313|EMBL:KJK20062.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
Succinate dehydrogenase hydrophobic anchor protein
H2-18-all-fractions_k255_5193110_16

Not on your lists

13762..14118
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000381329D
Putative succinate dehydrogenase/fumarate reductase cytochrome b-556 subunit {ECO:0000313|EMBL:CBH98877.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
succinate dehydrogenase/fumarate reductase cytochrome b-556 subunit
H2-18-all-fractions_k255_5193110_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14155..15030
DNA (876bp) protein (292aa)
L-tartrate or fumarate dehydratase subunit alpha (EC:4.2.1.32)
fumarate hydratase n=1 Tax=Massilia niastensis RepID=UPI000370CD6C
Tax=CG_Rhodocyc_01
H2-18-all-fractions_k255_5193110_18
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15035..15646
DNA (612bp) protein (204aa)
L(+)-tartrate or fumarate dehydratase subunit beta n=1 Tax=Massilia niastensis RepID=UPI000364D43A
Putative Tartrate dehydratase beta subunit
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG17862.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
H2-18-all-fractions_k255_5193110_19

Not on your lists

15643..17385
DNA (1743bp) protein (581aa)
Putative succinate dehydrogenase {ECO:0000313|EMBL:CBH98880.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CBH98880.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
fumarate reductase n=1 Tax=Massilia niastensis RepID=UPI000381EBFB
Succinate dehydrogenase flavoprotein subunit
H2-18-all-fractions_k255_5193110_20
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17598..18611
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000376AD9C
periplasmic subtsrate-binding protein
Putative periplasmic subtsrate-binding protein {ECO:0000313|EMBL:CAP40745.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
H2-18-all-fractions_k255_5193110_21
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18648..19457
DNA (810bp) protein (270aa)
sulfonate ABC transporter ATP-binding lipoprotein n=1 Tax=Massilia niastensis RepID=UPI000361A998
ABC transporter {ECO:0000313|EMBL:KJK05039.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
ABC transporter
H2-18-all-fractions_k255_5193110_22

Not on your lists

19450..20325
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D03B3
ABC transporter, permease component {ECO:0000313|EMBL:CBH98884.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transmembranee ABC transporter protein
H2-18-all-fractions_k255_5193110_23

Not on your lists

20338..21309
DNA (972bp) protein (324aa)
Putative Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CBH98883.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CBH98883.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
serA2; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
Putative Phosphoglycerate dehydrogenase n=1 Tax=mine drainage metagenome RepID=E6PVC6_9ZZZZ
H2-18-all-fractions_k255_5193110_24

Not on your lists

21282..22286
DNA (1005bp) protein (335aa)
hypothetical protein, partial n=1 Tax=Massilia niastensis RepID=UPI000363D5ED
Putative dehydrogenase {ECO:0000313|EMBL:CBH98882.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
malate/L-lactate dehydrogenase
H2-18-all-fractions_k255_5193110_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22434..22898
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000361DCA4
Uncharacterized protein {ECO:0000313|EMBL:KGF81091.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative membrane protein
Displaying 25 items

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