ggKbase home page

H2-18-all-fractions_k255_5720198

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_5720198_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1035)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIH9_9BURK
DEAD/DEAH box helicase {ECO:0000313|EMBL:KGF81564.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
DEAD/DEAH box helicase family protein
H2-18-all-fractions_k255_5720198_2
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1032..2666)
DNA (1635bp) protein (545aa)
ATP-dependent DNA ligase Lig {ECO:0000313|EMBL:KFC66007.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KFC66007.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037E70A1
ATP dependent DNA ligase domain protein
H2-18-all-fractions_k255_5720198_3
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2659..3657)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DMZ0_9BURK
mRNA 3'-end processing factor {ECO:0000313|EMBL:KFC66006.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative exonuclease involved in mRNA processing
H2-18-all-fractions_k255_5720198_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3679..5427)
DNA (1749bp) protein (583aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036A9EF3
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KGF81562.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ATP-dependent DNA helicase RecQ
H2-18-all-fractions_k255_5720198_5
unknown

Not on your lists

5601..5720
DNA (120bp) protein (40aa)

This feature has no annotations

H2-18-all-fractions_k255_5720198_6
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5839..7422)
DNA (1584bp) protein (528aa)
Alkyl hydroperoxide reductase subunit F {ECO:0000313|EMBL:ELX11452.1}; EC=1.8.1.- {ECO:0000313|EMBL:ELX11452.1};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
NADH dehydrogenase n=1 Tax=Massilia niastensis RepID=UPI0003678598
ahpF; alkyl hydroperoxide reductase, F subunit
H2-18-all-fractions_k255_5720198_7
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7492..8055)
DNA (564bp) protein (188aa)
ahpC; peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E5H5_9BURK
Peroxiredoxin {ECO:0000313|EMBL:KFC65997.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
H2-18-all-fractions_k255_5720198_8
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8330..9553)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DMZ3_9BURK
Histidine kinase {ECO:0000313|EMBL:KFI06881.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
response regulator
H2-18-all-fractions_k255_5720198_9
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9550..10155)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E111_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU84592.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
CheB methylesterase
H2-18-all-fractions_k255_5720198_10
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10152..10979)
DNA (828bp) protein (276aa)
chemotaxis protein CheR n=1 Tax=Massilia niastensis RepID=UPI00036E20E1
Uncharacterized protein {ECO:0000313|EMBL:EKU84593.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
MCP methyltransferase, CheR-type
H2-18-all-fractions_k255_5720198_11
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10976..14449)
DNA (3474bp) protein (1158aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000371F098
Chemotaxis protein CheY {ECO:0000313|EMBL:KFI06884.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
H2-18-all-fractions_k255_5720198_12
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14565..17126)
DNA (2562bp) protein (854aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037B89A3
Excinuclease ABC subunit A {ECO:0000313|EMBL:KFI06885.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
ABC transporter related protein
H2-18-all-fractions_k255_5720198_13
unknown

Not on your lists

17421..17819
DNA (399bp) protein (133aa)

This feature has no annotations

H2-18-all-fractions_k255_5720198_14
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17877..19322
DNA (1446bp) protein (482aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM40248.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
H2-18-all-fractions_k255_5720198_15
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19378..19767)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D862_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL86551.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
H2-18-all-fractions_k255_5720198_16
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19832..20899)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DMU6_9BURK
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KFC65987.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
NAD-dependent dehydratase
H2-18-all-fractions_k255_5720198_17
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21069..21512)
DNA (444bp) protein (148aa)
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037D3835
Uncharacterized protein {ECO:0000313|EMBL:EYC51835.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
hypothetical protein
H2-18-all-fractions_k255_5720198_18
unknown

Not on your lists

comp(21727..22449)
DNA (723bp) protein (241aa)

This feature has no annotations

H2-18-all-fractions_k255_5720198_19
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22593..23063)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036AA259
Uncharacterized protein {ECO:0000313|EMBL:KFC65986.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
conserved hypothetical protein
H2-18-all-fractions_k255_5720198_20
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23067..25328)
DNA (2262bp) protein (754aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIJ3_9BURK
Putative ABC transporter {ECO:0000313|EMBL:KFC65985.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
ABC transporter transmembrane region family protein
Displaying 20 items

View Taxonomy