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H2-18-all-fractions_k255_5805760

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_5805760_1
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..160)
DNA (159bp) protein (53aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
Lipoamide dehydrogenase, E3 component is part of three enzyme complexes n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZCR3_9BRAD
lipoamide dehydrogenase, E3 component is part of three enzyme complexes
H2-18-all-fractions_k255_5805760_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174..602)
DNA (429bp) protein (143aa)
dihydrolipoamide acetyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI00036A188B
catalytic domain of components of various dehydrogenase complexes
Catalytic domain of components of various dehydrogenase complexes {ECO:0000313|EMBL:ACS21937.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
H2-18-all-fractions_k255_5805760_3
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

664..1530
DNA (867bp) protein (289aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC:2.3.1.12)
dihydrolipoamide acetyltransferase n=1 Tax=Massilia niastensis RepID=UPI0003746779
H2-18-all-fractions_k255_5805760_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1541..3346
DNA (1806bp) protein (602aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
lpdA; dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Massilia niastensis RepID=UPI00035C3669
H2-18-all-fractions_k255_5805760_5
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3495..4856)
DNA (1362bp) protein (454aa)
Two component system histidine kinase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S1V4_9BURK
Histidine kinase {ECO:0000313|EMBL:KJK17251.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
HAMP domain protein
H2-18-all-fractions_k255_5805760_6
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4861..5538)
DNA (678bp) protein (226aa)
Two component transcriptional regulator n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S1V5_9BURK
XRE family transcriptional regulator {ECO:0000313|EMBL:KJK17252.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
response regulator
H2-18-all-fractions_k255_5805760_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5575..6006)
DNA (432bp) protein (144aa)
Ion transporter {ECO:0000313|EMBL:KGF79669.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Ion transport 2 domain-containing protein id=12498684 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
H2-18-all-fractions_k255_5805760_8
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6031..7473)
DNA (1443bp) protein (481aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JDF5_BURP8
RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ACC69672.1}; Flags: Precursor;; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
H2-18-all-fractions_k255_5805760_9
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7475..10639)
DNA (3165bp) protein (1055aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036414EC
Multidrug resistance protein MexB {ECO:0000313|EMBL:CDG83944.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
mexB; multidrug resistance protein MexB
H2-18-all-fractions_k255_5805760_10
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10653..11861)
DNA (1209bp) protein (403aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S1V8_9BURK
Hemolysin D {ECO:0000313|EMBL:KJK17253.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
mepA; multidrug/solvent efflux pump periplasmic linker protein mepA
H2-18-all-fractions_k255_5805760_11
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12057..14789
DNA (2733bp) protein (911aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0GB62_9BURK
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EOA05852.1}; TaxID=864073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum frisingense GSF30.;"
diguanylate cyclase
H2-18-all-fractions_k255_5805760_12
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14773..17934)
DNA (3162bp) protein (1054aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036414EC
Multidrug resistance protein MexB {ECO:0000313|EMBL:CDG83944.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
mexB; multidrug resistance protein MexB
H2-18-all-fractions_k255_5805760_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18101..18979
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Serratia liquefaciens ATCC 27592 RepID=S5ES10_SERLI
Oxidoreductase {ECO:0000313|EMBL:KGF79668.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H2-18-all-fractions_k255_5805760_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19130..19315)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003738361
Uncharacterized protein {ECO:0000313|EMBL:KGF79657.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_5805760_15
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19438..20100)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E0V0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU83040.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
bacterial regulatory s, tetR family protein
H2-18-all-fractions_k255_5805760_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20214..21371
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003787C6E
Secretion protein HlyD {ECO:0000313|EMBL:KGF79655.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hlyD secretion family protein
H2-18-all-fractions_k255_5805760_17
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21381..22988
DNA (1608bp) protein (536aa)
DSBA oxidoreductase n=1 Tax=Massilia niastensis RepID=UPI0003696420
Drug:H+ antiporter-2 family drug resistance MFS transporter {ECO:0000313|EMBL:KFC65625.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
drug resistance MFS transporter, drug:H+ antiporter-1 family protein
H2-18-all-fractions_k255_5805760_18
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23115..24548
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037C2AF2
NodT family efflux transporter, outer membrane factor (OMF) lipoprotein {ECO:0000313|EMBL:KFC65626.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
H2-18-all-fractions_k255_5805760_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24617..26389
DNA (1773bp) protein (591aa)
NUDT3; nudix hydrolase 3 domain protein (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DEC3_9BURK
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KGF79652.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
H2-18-all-fractions_k255_5805760_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26758..27447
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003792222
Uncharacterized protein {ECO:0000313|EMBL:KGF79648.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
H2-18-all-fractions_k255_5805760_21
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27600..28733
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DFP9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU83048.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
putative phospholipid-binding domain protein
H2-18-all-fractions_k255_5805760_22
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28879..29718
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DEC6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU83049.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
HDOD domain protein
H2-18-all-fractions_k255_5805760_23
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29790..31166
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00035F7709
Serine protease {ECO:0000313|EMBL:KFI05794.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
serine protease
H2-18-all-fractions_k255_5805760_24
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31168..31935
DNA (768bp) protein (256aa)
membrane protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034B0874
Putative stomatin/prohibitin-family membrane protease subunit {ECO:0000313|EMBL:KFC71434.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative stomatin-like protein
H2-18-all-fractions_k255_5805760_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32019..33185)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037AF606
Membrane protein {ECO:0000313|EMBL:KGF79640.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
major facilitator superfamily protein
H2-18-all-fractions_k255_5805760_26
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(33321..33815)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000349AE24
Cupin {ECO:0000313|EMBL:KIJ79566.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
H2-18-all-fractions_k255_5805760_27
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33875..34480)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DWN1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU83052.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
conserved hypothetical protein
H2-18-all-fractions_k255_5805760_28
unknown

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comp(34549..35103)
DNA (555bp) protein (185aa)

This feature has no annotations

H2-18-all-fractions_k255_5805760_29
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35527..38526
DNA (3000bp) protein (1000aa)
Rhs element Vgr protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PBN7_9BURK
Rhs element Vgr protein {ECO:0000313|EMBL:ELX08957.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
rhs element Vgr family protein
H2-18-all-fractions_k255_5805760_30
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38541..40259
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DHJ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82776.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
Displaying items 1-30 of 63 in total

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