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H2-18-all-fractions_k255_2737162_26

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(36389..36625)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EA2100 similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 78.0
  • Bit_score: 153
  • Evalue 5.40e-35
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 78.0
  • Bit_score: 153
  • Evalue 1.50e-35
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 78.0
  • Bit_score: 153
  • Evalue 7.50e-35

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
ATGAGCAATAAAGGGCAACTGTTACAAGACCCATTCCTCAATGCCTTGCGCAAAGAGCACGTTCCCGTCTCGATCTATCTGGTCAACGGGATCAAACTCCAAGGACATATCGAGTCCTTCGATCAATACGTGGTCCTGCTACGTAATACGGTTACCCAAATGGTCTACAAGCATGCAATTTCGACGGTCGTCCCGGCCCGCGCGGTCAACCTCAACCTCGAAGCGGAAGCTGAGTAA
PROTEIN sequence
Length: 79
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGHIESFDQYVVLLRNTVTQMVYKHAISTVVPARAVNLNLEAEAE*