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H2-18-all-fractions_k255_2737162

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_2737162_1
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2316)
DNA (2316bp) protein (772aa)
Putative secreted protein n=1 Tax=Xanthomonas campestris pv. vesicatoria (strain 85-10) RepID=Q3BSM7_XANC5
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:CAJ24182.1}; Flags: Precursor;; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
H2-18-all-fractions_k255_2737162_2
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2313..3146)
DNA (834bp) protein (278aa)
Sugar ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC36_9GAMM
Sugar ABC transporter, sugar permease protein 2 USSDB1D {ECO:0000313|EMBL:KFE71981.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
H2-18-all-fractions_k255_2737162_3
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3143..4021)
DNA (879bp) protein (293aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WC37_9GAMM
ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
H2-18-all-fractions_k255_2737162_4
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4018..5277)
DNA (1260bp) protein (420aa)
ABC transporter substrate-binding protein n=1 Tax=Dyella japonica RepID=UPI0003052828
ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
H2-18-all-fractions_k255_2737162_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5304..6743)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NMY4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFE71978.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
H2-18-all-fractions_k255_2737162_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6822..9695)
DNA (2874bp) protein (958aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000366072A
TonB-dependent receptor
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-18-all-fractions_k255_2737162_7
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9750..10781)
DNA (1032bp) protein (344aa)
Putative LacI family transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUG0_9GAMM
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
H2-18-all-fractions_k255_2737162_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

11005..14793
DNA (3789bp) protein (1263aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744BB8
cellobiose phosphorylase
Tax=RBG_16_RIF_WS3X_71_46_curated
H2-18-all-fractions_k255_2737162_9
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14824..15942
DNA (1119bp) protein (373aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Janthinobacterium lividum RepID=UPI000287F059
Various polyols ABC transporter, ATP-binding component {ECO:0000313|EMBL:EZP35775.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
ABC transporter family protein
H2-18-all-fractions_k255_2737162_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15988..17382)
DNA (1395bp) protein (465aa)
Putative major facilitator superfamily transporter n=1 Tax=Janthinobacterium lividum RepID=A0SYX7_9BURK
Multidrug MFS transporter {ECO:0000313|EMBL:KGF82569.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
major Facilitator Superfamily protein
H2-18-all-fractions_k255_2737162_11
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17846..19060
DNA (1215bp) protein (405aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
purT; phosphoribosylglycinamide formyltransferase 2 (EC:2.1.2.-)
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCV6_9BURK
H2-18-all-fractions_k255_2737162_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19154..19762)
DNA (609bp) protein (203aa)
Peptidoglycan binding protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BBC6_9ARCH
peptidoglycan binding protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
H2-18-all-fractions_k255_2737162_13
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20039..20377
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ASB2_AZOBR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
H2-18-all-fractions_k255_2737162_14
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20477..22078)
DNA (1602bp) protein (534aa)
Serine/threonine protein kinase n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SP83_RHOPH
parallel beta-helix repeat-containing protein
Parallel beta-helix repeat-containing protein {ECO:0000313|EMBL:AIR99220.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
H2-18-all-fractions_k255_2737162_15
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22720..23931)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DGU5_9BURK
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:KFI06722.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
aminotransferase class I and II family protein
H2-18-all-fractions_k255_2737162_16
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24037..26124
DNA (2088bp) protein (696aa)
excinuclease ABC subunit B n=1 Tax=Massilia niastensis RepID=UPI000360FFED
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
uvrB; excinuclease ABC, B subunit
H2-18-all-fractions_k255_2737162_17
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26354..26812)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82T24_NITEU
RES domain-containing protein {ECO:0000313|EMBL:KFC68500.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
RES domain-containing protein
H2-18-all-fractions_k255_2737162_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26902..28938)
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCV3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF80990.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hybrid histidine kinase
H2-18-all-fractions_k255_2737162_19
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29023..29619)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035C7821
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
marC integral membrane family protein
H2-18-all-fractions_k255_2737162_20
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29739..30278)
DNA (540bp) protein (180aa)
nicotinate phosphoribosyltransferase n=1 Tax=Massilia niastensis RepID=UPI00037C514B
Uncharacterized protein {ECO:0000313|EMBL:EKU82501.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
phosphoribosyl transferase domain protein
H2-18-all-fractions_k255_2737162_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30308..31627)
DNA (1320bp) protein (440aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
purA; adenylosuccinate synthetase (EC:6.3.4.4)
adenylosuccinate synthetase n=1 Tax=Massilia niastensis RepID=UPI00036AEAB5
H2-18-all-fractions_k255_2737162_22
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31633..32787)
DNA (1155bp) protein (385aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCU8_9BURK
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
tRNA synthetase class II core domain family protein
H2-18-all-fractions_k255_2737162_23
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32974..33849)
DNA (876bp) protein (292aa)
membrane protein n=1 Tax=Massilia niastensis RepID=UPI00037C5FA7
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hflC; hflC protein
H2-18-all-fractions_k255_2737162_24
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33849..35156)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035FAA7A
HflK protein {ECO:0000313|EMBL:EKU82497.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hflK; hflK protein
H2-18-all-fractions_k255_2737162_25
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35160..36383)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000378EFD8
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hflX; GTP-binding proten HflX
H2-18-all-fractions_k255_2737162_26
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36389..36625)
DNA (237bp) protein (79aa)
RNA-binding protein Hfq n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EA2100
RNA-binding protein Hfq
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
H2-18-all-fractions_k255_2737162_27
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36772..38115)
DNA (1344bp) protein (448aa)
GTP-binding protein Der n=1 Tax=Massilia niastensis RepID=UPI000377F054
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
engA; GTP-binding protein
H2-18-all-fractions_k255_2737162_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38124..39278)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036C066B
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
yfgL; outer membrane assembly lipoprotein YfgL
H2-18-all-fractions_k255_2737162_29
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39459..40115)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037C3BB7
Uncharacterized protein {ECO:0000313|EMBL:EKU82492.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
putative uncharacterized protein
H2-18-all-fractions_k255_2737162_30
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(40161..41504)
DNA (1344bp) protein (448aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
histidyl-tRNA synthase n=1 Tax=Massilia niastensis RepID=UPI000371E837
Displaying items 1-30 of 34 in total

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