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H2-18-all-fractions_k255_5023656_17

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: 19595..20323

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DDV2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 242.0
  • Bit_score: 429
  • Evalue 1.20e-117
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 245.0
  • Bit_score: 438
  • Evalue 6.20e-120
fliA; RNA polymerase sigma factor for flagellar operon similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 241.0
  • Bit_score: 422
  • Evalue 7.10e-116

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Taxonomy

Massilia sp. LC238 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGTACACGGTCAAAGGGAAAGCGAACAAGGATCACTTGCTGACGGAGCACATGCCACTGGTGAAGAAGCTCGCCCACCACATGAAGGCCAAGCTGCCGCCTTCTGTGGAAGTGGATGACCTGGTGCAGGCCGGCATGATGGGGCTGCTCGATGCGATCAACCGCTACGAGGACAACCATGGCGCCCAGTTCGAAACCTATGCCGTGCTGCGCATCCGCGGGGCGATGCTGGACGAACTGCGCAACAACGACTGGATGCCGCGCAGCACCCGCCAGAACATGCGCAAGCTCGAAGCGGCGATGTCCGCGTTGCAGCAGCGGCTCGGCCGCGCCCCGTCCGAATCGGAAGTCGCGAAGAGCCTCAAGATGCCGCTCGAAGACTACCAGGAGATGCTGTTCGACAGCGGCGGCCACCAGCTTGTGTACTACGAAGATTTCCACGACGAGGACGGCAACGACAGCTTCCTCGACCGGTTCGCGGTCGACGACGACGACCCGCTGCGCAGCCTGCTCGAGACCGACTTCCGGCAGGCCGTGATCGACGCCATCGACGCGCTGCCGCCGCGCGAGAAGCTGTTGATGGGCCTGTACTACGAGGAAGAGCTCAACCTGAAGGAAATCGGCGCCGTGATGGGCGTGTCTGAATCGCGCGTCTCGCAGCTGCACACCCAGGCGGTGGCGCGGCTGCGTGCGGCATTACGGGAGCAGCTGTGGACTGGTCCAGCCTAG
PROTEIN sequence
Length: 243
MYTVKGKANKDHLLTEHMPLVKKLAHHMKAKLPPSVEVDDLVQAGMMGLLDAINRYEDNHGAQFETYAVLRIRGAMLDELRNNDWMPRSTRQNMRKLEAAMSALQQRLGRAPSESEVAKSLKMPLEDYQEMLFDSGGHQLVYYEDFHDEDGNDSFLDRFAVDDDDPLRSLLETDFRQAVIDAIDALPPREKLLMGLYYEEELNLKEIGAVMGVSESRVSQLHTQAVARLRAALREQLWTGPA*