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H2-18-all-fractions_k255_5023656

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_5023656_1
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74..3154)
DNA (3081bp) protein (1027aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
ribonuclease, Rne/Rng family domain protein (EC:3.1.4.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000371495D
H2-18-all-fractions_k255_5023656_2
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3896..4816
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
rluC; 23S rRNA pseudouridylate synthase (EC:4.2.1.70)
Pseudouridine synthase n=1 Tax=Janthinobacterium sp. HH01 PF87_9BURK">RepID=L9PF87_9BURK
H2-18-all-fractions_k255_5023656_3
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4993..5652
DNA (660bp) protein (220aa)
gph; phosphoglycolate phosphatase (EC:3.1.3.18)
HAD hydrolase, family IIIA n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DHS4_9BURK
HAD family hydrolase {ECO:0000313|EMBL:KFI08794.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
H2-18-all-fractions_k255_5023656_4
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5652..6041
DNA (390bp) protein (130aa)
Iron-sulfur cluster-binding protein, Rieske family n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PHI2_9BURK
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:KFI08793.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
rieske [2Fe-2S] domain protein
H2-18-all-fractions_k255_5023656_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6038..7039
DNA (1002bp) protein (334aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DF68_9BURK
Peptidase S49 {ECO:0000313|EMBL:KGF81372.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
peptidase S49 family protein
H2-18-all-fractions_k255_5023656_6
unknown

Not on your lists

comp(7281..7577)
DNA (297bp) protein (99aa)

This feature has no annotations

H2-18-all-fractions_k255_5023656_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7734..8501
DNA (768bp) protein (256aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pseudouridine synthase n=1 Tax=Massilia niastensis RepID=UPI00036F8FC5
conserved hypothetical protein
H2-18-all-fractions_k255_5023656_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8681..9754
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003690971
Uncharacterized protein {ECO:0000313|EMBL:KGF81370.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
phospholipase A1 family protein
H2-18-all-fractions_k255_5023656_9
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9827..10819
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000362B663
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:KFI08785.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
fumarylacetoacetate (FAA) hydrolase family protein
H2-18-all-fractions_k255_5023656_10
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11166..12359
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000347CF2E
UDP-N-acetylmuramyl pentapeptide phosphotransferase {ECO:0000313|EMBL:KFC69448.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
glycosyl transferase
H2-18-all-fractions_k255_5023656_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12504..13679
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000366D39A
Flagellar biosynthesis protein FlhB {ECO:0000313|EMBL:KGF81346.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flhB; flagellar biosynthetic protein FlhB
H2-18-all-fractions_k255_5023656_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13676..15784
DNA (2109bp) protein (703aa)
flagellar biosynthesis protein FlhA n=1 Tax=Massilia niastensis RepID=UPI00035E909F
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KGF81345.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flhA; flagellar biosynthesis protein FlhA
H2-18-all-fractions_k255_5023656_13
unknown

Not on your lists

15863..16129
DNA (267bp) protein (89aa)

This feature has no annotations

H2-18-all-fractions_k255_5023656_14
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(16145..17179)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031466B5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI14390.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
H2-18-all-fractions_k255_5023656_15
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17457..18761
DNA (1305bp) protein (435aa)
flagellar biosynthesis regulator FlhF n=1 Tax=Janthinobacterium lividum RepID=UPI000287C2AE
SRP54-type , GTPase domain protein
SRP54-type , GTPase domain protein {ECO:0000313|EMBL:CDG81866.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
H2-18-all-fractions_k255_5023656_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18754..19563
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037A3C0F
Antiactivator of flagellar biosynthesis FleN protein {ECO:0000313|EMBL:KGF81342.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
MotR protein
H2-18-all-fractions_k255_5023656_17
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19595..20323
DNA (729bp) protein (243aa)
RNA polymerase sigma factor FliA n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DDV2_9BURK
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
fliA; RNA polymerase sigma factor for flagellar operon
H2-18-all-fractions_k255_5023656_18
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20305..21051
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035DA802
Flagellar motor protein MotA {ECO:0000313|EMBL:KFC69439.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
motA/TolQ/ExbB proton channel family protein
H2-18-all-fractions_k255_5023656_19
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21053..21805
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036EB63B
Uncharacterized protein {ECO:0000313|EMBL:EKU82856.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
ompA family protein
H2-18-all-fractions_k255_5023656_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22179..22655)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035C18E6
Uncharacterized protein {ECO:0000313|EMBL:KGF81335.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flgN family protein
H2-18-all-fractions_k255_5023656_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22665..22973)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000381B52B
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:KFC69693.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
anti-sigma-28 factor, FlgM family protein
H2-18-all-fractions_k255_5023656_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23068..23781)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035C9F73
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flgA; flagella basal body P-ring formation protein FlgA
H2-18-all-fractions_k255_5023656_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23922..24344
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000362FB20
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flgB; flagellar basal-body rod protein FlgB
H2-18-all-fractions_k255_5023656_24
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24347..24748
DNA (402bp) protein (134aa)
flagellar basal body rod protein FlgC n=1 Tax=Janthinobacterium lividum RepID=UPI0002885693
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
flgC; flagellar basal-body rod protein FlgC
H2-18-all-fractions_k255_5023656_25
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24763..25476
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036C8D3B
FlgD flagellar hook capping protein {ECO:0000313|EMBL:KFC69689.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
flgD; basal-body rod modification protein flgD
H2-18-all-fractions_k255_5023656_26
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25507..27045
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036766B5
Flagellar hook protein FlgE {ECO:0000313|EMBL:KGF81329.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flgE; flagellar hook protein flgE
H2-18-all-fractions_k255_5023656_27
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27142..27882
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036B4976
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:KGF81328.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flgF; flagellar basal-body rod protein FlgF
H2-18-all-fractions_k255_5023656_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27947..28729
DNA (783bp) protein (261aa)
flagellar basal body rod protein FlgG n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036424C9
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:KGF81327.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flagellar basal-body rod protein FlgG
H2-18-all-fractions_k255_5023656_29
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28726..29376
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036B2784
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flagellar L-ring family protein
H2-18-all-fractions_k255_5023656_30
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29379..30482
DNA (1104bp) protein (368aa)
flagellar P-ring protein FlgI n=1 Tax=Massilia niastensis RepID=UPI0003640632
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
flagellar P-ring family protein
Displaying items 1-30 of 46 in total

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