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H2-18-all-fractions_k255_4350550

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H2-18-all-fractions_k255_4350550_1

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2..205
DNA (204bp) protein (68aa)
HD domain protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXP0_THERP
Uncharacterized protein {ECO:0000313|EMBL:KKL23968.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GGDEF: diguanylate cyclase (GGDEF) domain
H2-18-all-fractions_k255_4350550_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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244..630
DNA (387bp) protein (129aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
H2-18-all-fractions_k255_4350550_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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671..2272
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E049_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN12944.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
H2-18-all-fractions_k255_4350550_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2301..2687
DNA (387bp) protein (129aa)
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_4350550_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2620..3528)
DNA (909bp) protein (303aa)
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Probable endonuclease 4 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G2_CONWI
H2-18-all-fractions_k255_4350550_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3541..4806
DNA (1266bp) protein (422aa)
Glutamate--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G1_CONWI
glutamyl-tRNA synthetase
Tax=RBG_16_Actinobacteria_68_12_curated
H2-18-all-fractions_k255_4350550_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4867..5961
DNA (1095bp) protein (365aa)
Transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G0_CONWI
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB52020.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H2-18-all-fractions_k255_4350550_8
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5969..7162)
DNA (1194bp) protein (398aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
sensor histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI000382C2FA
mctS; two-component sensor histidine kinase
H2-18-all-fractions_k255_4350550_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7159..7536)
DNA (378bp) protein (126aa)
VanZ family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0F9_CONWI
VanZ family protein
VanZ family protein {ECO:0000313|EMBL:ADB52019.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H2-18-all-fractions_k255_4350550_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7569..7961
DNA (393bp) protein (131aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0F8_CONWI
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ADB52018.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H2-18-all-fractions_k255_4350550_11
unknown

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8010..8771
DNA (762bp) protein (254aa)

This feature has no annotations

H2-18-all-fractions_k255_4350550_12
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8768..9457
DNA (690bp) protein (230aa)
Serine phosphatase RsbU, regulator of sigma subunit n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R1T8_STRVP
Membrane protein {ECO:0000313|EMBL:EWT02001.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
putative magnesium/manganese-dependent protein phosphatase
H2-18-all-fractions_k255_4350550_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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9408..10550
DNA (1143bp) protein (381aa)
Glu/Leu/Phe/Val dehydrogenase dimerization region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZZ7_CONWI
Glu/Leu/Phe/Val dehydrogenase
Glu/Leu/Phe/Val dehydrogenase dimerization region {ECO:0000313|EMBL:ADB49973.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H2-18-all-fractions_k255_4350550_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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10550..11479
DNA (930bp) protein (310aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Cysteine synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0F1_CONWI
cysteine synthase
H2-18-all-fractions_k255_4350550_15
Spirochaeta thermophila, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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11476..11679
DNA (204bp) protein (68aa)
nirA; ferredoxin-nitrite reductase (EC:1.7.7.1)
Ferredoxin-nitrite reductase {ECO:0000313|EMBL:ADN02561.1}; EC=1.7.7.1 {ECO:0000313|EMBL:ADN02561.1};; TaxID=665571 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1).;"
Ferredoxin-nitrite reductase n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RN92_SPITD
H2-18-all-fractions_k255_4350550_16
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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11679..12449
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RN96_SPITD
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 {ECO:0000313|EMBL:AKG92630.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
Sulfur carrier protein adenylyltransferase ThiF
H2-18-all-fractions_k255_4350550_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12452..12769
DNA (318bp) protein (106aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase {ECO:0000313|EMBL:ADB52010.1}; EC=2.3.1.30 {ECO:0000313|EMBL:ADB52010.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Serine acetyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0F0_CONWI
Displaying 17 items

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