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H3-16-all-fractions_k255_4229665

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4229665_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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187..432
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D104_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20016.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
H3-16-all-fractions_k255_4229665_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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530..1057
DNA (528bp) protein (176aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D105_9BACT
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
H3-16-all-fractions_k255_4229665_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1054..2001
DNA (948bp) protein (316aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D106_9BACT
H3-16-all-fractions_k255_4229665_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1998..3278
DNA (1281bp) protein (427aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Dihydroorotase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D108_9BACT
pyrC; dihydroorotase
H3-16-all-fractions_k255_4229665_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3376..3825)
DNA (450bp) protein (150aa)
Putative signal transduction protein with CBS domains n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMQ1_9BACT
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:EEF58826.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative signal transduction protein with CBS domains
H3-16-all-fractions_k255_4229665_6
unknown

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comp(3920..4108)
DNA (189bp) protein (63aa)

This feature has no annotations

H3-16-all-fractions_k255_4229665_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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4137..5135
DNA (999bp) protein (333aa)
Helix-turn-helix, type 11 domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWY1_OPITP
helix-turn-helix, type 11 domain-containing protein
Helix-turn-helix, type 11 domain protein {ECO:0000313|EMBL:ACB75092.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
H3-16-all-fractions_k255_4229665_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5211..6566)
DNA (1356bp) protein (452aa)
FeS assembly protein SufD n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D294_9BACT
FeS assembly protein SufD {ECO:0000313|EMBL:EDY19334.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Fe-S cluster assembly protein SufD
H3-16-all-fractions_k255_4229665_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(6632..8041)
DNA (1410bp) protein (470aa)
FeS assembly protein SufB n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D293_9BACT
FeS assembly protein SufB {ECO:0000313|EMBL:EDY19333.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Fe-S cluster assembly protein SufB
H3-16-all-fractions_k255_4229665_10
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(8052..8840)
DNA (789bp) protein (263aa)
FeS assembly ATPase SufC n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFJ2_9BACT
FeS assembly ATPase SufC {ECO:0000313|EMBL:EDY81226.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
iron ABC transporter ATP-binding protein
H3-16-all-fractions_k255_4229665_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8996..9493
DNA (498bp) protein (166aa)
Response regulator receiver protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9Q8_9BACT
Response regulator receiver protein {ECO:0000313|EMBL:EDY16839.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
signal transduction histidine kinase NtrB
H3-16-all-fractions_k255_4229665_12
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9655..10125)
DNA (471bp) protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL36525.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
enterocin
H3-16-all-fractions_k255_4229665_13
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10564..10770)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EI45_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KJB91273.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Zinc finger, CDGSH-type
Displaying 13 items

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