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H3-16-all-fractions_k255_3178077_6

Organism: H3-16-all-fractions_metab_conc_110

near complete RP 40 / 55 BSCG 42 / 51 MC: 1 ASCG 10 / 38
Location: comp(4453..5829)

Top 3 Functional Annotations

Value Algorithm Source
Ysh1p: subunit of polyadenylation factor I, putative n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017466CC similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 458.0
  • Bit_score: 452
  • Evalue 3.30e-124
Predicted exonuclease of the beta-lactamase fold involved in RNA processing {ECO:0000313|EMBL:CCG91385.1}; TaxID=1156937 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum fumariolicum SolV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 460.0
  • Bit_score: 421
  • Evalue 8.70e-115
ysh1; exonuclease of the beta-lactamase fold involved in RNA processing similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 459.0
  • Bit_score: 415
  • Evalue 1.30e-113

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Taxonomy

Methylacidiphilum fumariolicum → Methylacidiphilum → Methylacidiphilales → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1377
TTGAAGTTCATCAATCTCACGCGCCGGACTGAGATCGGCGCCAACAGTTATTACTTAGAGGCGGCTGGGCAACGGCTCGTCCTCGACAGCGGGATGCATCCAAAGGAGGAGGGCGACGAAGCCCTTCCCAATTTCCGCGCCCTTGGCGACCGAATGCTTGACGCGATCGTGGTTTCACACGCGCATCTCGACCACTTCGGGACATTGCCACTCCTCATGCAGCGCCAGCCGCAAGCGCGGATTTTCATGACCGAACCCACGGCGGAAATCGGCAGCGCACTTCTGCACAACTCAGTCAATGTCATGACTCGGCAGCGCGAAGAGCTGGGGCTCGTGATGTATCCGCTGTTCACTCATCGCCAGACGGACCGAGCCTCGGAGCAATGGCGGTCCTGCCCGATGCGGCAGCCATTCACCCTCGGCGGCGAACGCGCCCGGCGCGAGAATGAGGAGGGAATCACGGTCGAATTTGTCGACGCCGGCCATGTCCTCGGCGCTGCTGGCGTCATCCTCCGCGCTGAAGGACGGACAATCTTTTACACTGGAGATGTCAACTTCGACGACCAGACAATCACGGCGAGTGCCGTGTTTCCGGAGGCAAACGTCGATGTCCTGATCATCGAAACGACGCGTGGCGACAGTCCGTTACCGGCAGGTTTCGACCGTGCGCAAGAAGAACGGCGCCTCGCCGAAGCGATCGACGGGGCCTTCCGTGCCGGAGGGTGTGTTCTCATTCCGGTTTTCGCACTCGGGAAGACCCAGGAAATCCTCGGCATGATTCACAAGTTTCGCCGCGAAAAAACGCTGGGTGAGTTCCCCGTTTACATCGGCGGCCTCAGCGTGAAGATGACTGAGATTTACGATCGCCGGGCCCTCACCTCTCGACGCTTGCTGCCGCGCCTGCAATTGCTCGAAGAAGTGGACCCTTTCGTTCTCAACGGCCAGAACATTCACGATTCGCCTGCGCGGGCGGGGCGCGTTTACGCTCTTTCCAGTGGCATGATGACGCCGAAAACTCTTTCGAACATTTTTGCGCGCCGGATCATCGATGATCCCAAACACTCAATCTTTTTTGTCGGTTACGCCGATCCGGAATCGCCCGGTGGCATAATCAGAGCCGCGAAGCCTGGCGATCTCGTCACCCTCGATCCCGAGGAACCGCCGCAGCGTCTGTCCTGCCAGATCGAACAATTCCAGTTCAGCGCCCATGCTTCCCGCGAATCGATCGTTTCCTATGTGAAGAAGCTCGCGCCAAAGAAAATCGTACTGGTGCACGGTGACGTCCCGGCGGTGGAATGGACGCGCGCCCAGCTCATCGCCGAGTTGCCCGGTAGTGAGGTGATTGTTCCGACTCCGGGCGTGGAACTGGAATTGTAA
PROTEIN sequence
Length: 459
LKFINLTRRTEIGANSYYLEAAGQRLVLDSGMHPKEEGDEALPNFRALGDRMLDAIVVSHAHLDHFGTLPLLMQRQPQARIFMTEPTAEIGSALLHNSVNVMTRQREELGLVMYPLFTHRQTDRASEQWRSCPMRQPFTLGGERARRENEEGITVEFVDAGHVLGAAGVILRAEGRTIFYTGDVNFDDQTITASAVFPEANVDVLIIETTRGDSPLPAGFDRAQEERRLAEAIDGAFRAGGCVLIPVFALGKTQEILGMIHKFRREKTLGEFPVYIGGLSVKMTEIYDRRALTSRRLLPRLQLLEEVDPFVLNGQNIHDSPARAGRVYALSSGMMTPKTLSNIFARRIIDDPKHSIFFVGYADPESPGGIIRAAKPGDLVTLDPEEPPQRLSCQIEQFQFSAHASRESIVSYVKKLAPKKIVLVHGDVPAVEWTRAQLIAELPGSEVIVPTPGVELEL*