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H3-16-all-fractions_k255_6349910

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_6349910_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1428
DNA (1428bp) protein (476aa)
Sulfotransferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NCA9_9GAMM
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGG88310.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
H3-16-all-fractions_k255_6349910_2

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1467..1952
DNA (486bp) protein (162aa)
AspG n=1 Tax=uncultured bacterium pTW3 RepID=B8PZX2_9BACT
AspG {ECO:0000313|EMBL:ACA34430.1}; TaxID=504467 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW3.;"
asparaginase
H3-16-all-fractions_k255_6349910_3
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2054..4306)
DNA (2253bp) protein (751aa)
MprB n=1 Tax=uncultured bacterium pTW3 RepID=B8PZX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFN43336.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
peptidase M4 thermolysin
H3-16-all-fractions_k255_6349910_4

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comp(4713..5294)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=uncultured bacterium pTW2 RepID=B8PZW3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ACA34421.1}; TaxID=504464 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW2.;"
FeS assembly SUF system protein SufT
H3-16-all-fractions_k255_6349910_5

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5358..5786
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured bacterium pTW2 RepID=B8PZW4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ACA34422.1}; TaxID=504464 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW2.;"
membrane protein
H3-16-all-fractions_k255_6349910_6

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comp(5793..7208)
DNA (1416bp) protein (472aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1403001 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac36W.;"
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta n=1 Tax=uncultured bacterium pTW3 RepID=B8PZX7_9BACT
H3-16-all-fractions_k255_6349910_7
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7205..7513)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B8T6_9XANT
NAD(P) transhydrogenase {ECO:0000313|EMBL:KER80444.1}; TaxID=454957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. celebensis.;"
pyridine nucleotide transhydrogenase subunit alpha
H3-16-all-fractions_k255_6349910_8
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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7641..8045
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BB33_9GAMM
hypothetical protein
Tax=GWF2_Sideroxydans_59_14_curated
H3-16-all-fractions_k255_6349910_9
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8065..8685
DNA (621bp) protein (207aa)
RpoE n=1 Tax=uncultured bacterium pTW3 RepID=B8PZX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EYR65823.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
RNA polymerase sigma70 factor
H3-16-all-fractions_k255_6349910_10
unknown

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8720..9097
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium pTW3 RepID=B8PZY0_9BACT
H3-16-all-fractions_k255_6349910_11

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9101..9514
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium pTW3 RepID=B8PZY1_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACA34439.1}; TaxID=504467 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW3.;"
hypothetical protein
H3-16-all-fractions_k255_6349910_12

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comp(9548..10687)
DNA (1140bp) protein (380aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
Pnt n=1 Tax=uncultured bacterium pTW3 RepID=B8PZY2_9BACT
Pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:AGW45532.1}; TaxID=1403001 species="Bacteria; environmental samples.;" source="uncultured bacterium Lac36W.;"
H3-16-all-fractions_k255_6349910_13

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comp(10743..12914)
DNA (2172bp) protein (724aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium pTW3 RepID=B8PZY3_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACA34441.1}; TaxID=504467 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW3.;"
hypothetical protein
H3-16-all-fractions_k255_6349910_14

Not on your lists

13072..13644
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium pTW3 RepID=B8PZY4_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACA34442.1}; TaxID=504467 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW3.;"
nitroreductase
H3-16-all-fractions_k255_6349910_15

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13641..14561
DNA (921bp) protein (307aa)
Exo n=1 Tax=uncultured bacterium pTW3 RepID=B8PZY5_9BACT
Exo {ECO:0000313|EMBL:ACA34443.1}; TaxID=504467 species="Bacteria; candidate division WS6; environmental samples.;" source="uncultured bacterium pTW3.;"
5'-3' exonuclease
H3-16-all-fractions_k255_6349910_16
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14623..15165
DNA (543bp) protein (181aa)
NUDIX hydrolase n=1 Tax=uncultured bacterium pTW3 RepID=B8PZY6_9BACT
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KGM56673.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
NUDIX hydrolase
H3-16-all-fractions_k255_6349910_17
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15182..16123)
DNA (942bp) protein (314aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
proline iminopeptidase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FDDBDB
proline iminopeptidase
H3-16-all-fractions_k255_6349910_18
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16191..17048)
DNA (858bp) protein (286aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
Release factor glutamine methyltransferase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USK8_PSEUP
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
H3-16-all-fractions_k255_6349910_19
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17118..19808)
DNA (2691bp) protein (897aa)
aminopeptidase N n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B38332
Aminopeptidase N {ECO:0000313|EMBL:KGQ19555.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
aminopeptidase N
H3-16-all-fractions_k255_6349910_20
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20002..20865)
DNA (864bp) protein (288aa)
UPI0003CF93D5 related cluster n=1 Tax=unknown RepID=UPI0003CF93D5
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAO38854.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein
H3-16-all-fractions_k255_6349910_21
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20862..21830)
DNA (969bp) protein (323aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YAM4_MESOW
40-residue YVTN family beta-propeller repeat protein
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:AEH88784.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
H3-16-all-fractions_k255_6349910_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21817..22707)
DNA (891bp) protein (297aa)
Cytochrome c oxidase caa3 assembly factor family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WW54_9SPHN
DNA, contig: SP663 {ECO:0000313|EMBL:GAN15704.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
H3-16-all-fractions_k255_6349910_23
unknown

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comp(22704..23030)
DNA (327bp) protein (109aa)

This feature has no annotations

H3-16-all-fractions_k255_6349910_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23041..23646)
DNA (606bp) protein (202aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 3 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YT75_9RHIZ
Heme/copper-type cytochrome/quinol oxidase, subunit 3 {ECO:0000313|EMBL:EIM27167.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
cytochrome c oxidase subunit III
H3-16-all-fractions_k255_6349910_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23646..24845)
DNA (1200bp) protein (400aa)
Cytochrome c oxidase, subunit I n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CLF5_VARPS
cytochrome C oxidase subunit I
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ACS17350.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
Displaying 25 items

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