ggKbase home page

H3-16-all-fractions_k255_1777352

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_1777352_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(232..1011)
DNA (780bp) protein (260aa)
DNA-formamidopyrimidine glycosylase {ECO:0000313|EMBL:ACU63898.1}; EC=3.2.2.23 {ECO:0000313|EMBL:ACU63898.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
DNA-formamidopyrimidine glycosylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKY8_CHIPD
DNA-formamidopyrimidine glycosylase
H3-16-all-fractions_k255_1777352_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1124..1852)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKY9_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63899.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
H3-16-all-fractions_k255_1777352_3
unknown

Not on your lists

1983..2306
DNA (324bp) protein (108aa)

This feature has no annotations

H3-16-all-fractions_k255_1777352_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2454..3326)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEC6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98336.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_1777352_5
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3759..4172)
DNA (414bp) protein (138aa)
RNA-binding protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017466C4
Protein containing RNA recognition motif, RNP-1 domain protein {ECO:0000313|EMBL:EKJ99839.1}; TaxID=993517 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
RNP-1 like RNA-binding protein
H3-16-all-fractions_k255_1777352_6
unknown

Not on your lists

comp(4449..4862)
DNA (414bp) protein (138aa)

This feature has no annotations

H3-16-all-fractions_k255_1777352_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5119..6264
DNA (1146bp) protein (382aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBB4_NIAKG
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEW02497.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_1777352_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6257..6973
DNA (717bp) protein (239aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBB5_NIAKG
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEW02498.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_1777352_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6950..7561)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GK95_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH54320.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
H3-16-all-fractions_k255_1777352_10
unknown

Not on your lists

7699..7878
DNA (180bp) protein (60aa)

This feature has no annotations

H3-16-all-fractions_k255_1777352_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7957..8445
DNA (489bp) protein (163aa)
Nuclear protein SET n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDP1_NIAKG
nuclear protein SET
Nuclear protein SET {ECO:0000313|EMBL:AEW01491.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
H3-16-all-fractions_k255_1777352_12
unknown

Not on your lists

8492..8797
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying 12 items

View Taxonomy