ggKbase home page

H3-16-all-fractions_k255_5516918

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_5516918_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1..492
DNA (492bp) protein (164aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1K9_ROSS1
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_5516918_2
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

499..1767
DNA (1269bp) protein (423aa)
UDP-glucose dehydrogenase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PH17_9DELT
lipopolysaccharide biosynthesis protein
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
H3-16-all-fractions_k255_5516918_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1767..2723
DNA (957bp) protein (319aa)
oxidoreductase id=24532286 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
oxidoreductase domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_5516918_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2716..3366
DNA (651bp) protein (217aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Laceyella sacchari RepID=UPI0003B2F802
transferase
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_5516918_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3353..4813)
DNA (1461bp) protein (487aa)
Proprotein convertase subtilisin/kexin type 6 (EC:3.4.21.-)
Proprotein convertase subtilisin/kexin type 6 n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S904_ACTS5
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_5516918_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(4807..6384)
DNA (1578bp) protein (526aa)
SpoIID/LytB domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF26_CONWI
SpoIID/LytB domain-containing protein
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_5516918_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6547..7941
DNA (1395bp) protein (465aa)
Serine/threonine protein kinase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXG8_RUBXD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABG03910.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
H3-16-all-fractions_k255_5516918_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7942..8931)
DNA (990bp) protein (330aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2D7_SPHTD
dTDP-glucose 4,6-dehydratase
H3-16-all-fractions_k255_5516918_9
Paenibacillus darwinianus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8968..9846)
DNA (879bp) protein (293aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI000301DEFD
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EXX86049.1}; TaxID=1380763 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus darwinianus.;"
H3-16-all-fractions_k255_5516918_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9801..10259)
DNA (459bp) protein (153aa)
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_5516918_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10260..11027)
DNA (768bp) protein (256aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YBG5_DICT6
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_5516918_12
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(11024..12256)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI00036B1074
major facilitator transporter
Tax=RBG_13_Chloroflexi_66_10_curated
H3-16-all-fractions_k255_5516918_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12213..12878)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFH2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH88652.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
H3-16-all-fractions_k255_5516918_14
unknown

Not on your lists

13042..13248
DNA (207bp) protein (69aa)

This feature has no annotations

H3-16-all-fractions_k255_5516918_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13354..13788
DNA (435bp) protein (145aa)
Heat shock protein Hsp20 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF87_CONWI
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:ADB53680.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H3-16-all-fractions_k255_5516918_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13846..16284
DNA (2439bp) protein (813aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Lon protease n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF86_CONWI
H3-16-all-fractions_k255_5516918_17
unknown

Not on your lists

comp(16265..16720)
DNA (456bp) protein (152aa)

This feature has no annotations

H3-16-all-fractions_k255_5516918_18
unknown

Not on your lists

16800..17222
DNA (423bp) protein (141aa)

This feature has no annotations

H3-16-all-fractions_k255_5516918_19
unknown

Not on your lists

comp(17232..17369)
DNA (138bp) protein (46aa)

This feature has no annotations

H3-16-all-fractions_k255_5516918_20
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17493..18944)
DNA (1452bp) protein (484aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W957_DESOD
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AET68698.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
H3-16-all-fractions_k255_5516918_21
unknown

Not on your lists

comp(18976..19365)
DNA (390bp) protein (130aa)

This feature has no annotations

H3-16-all-fractions_k255_5516918_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19378..19746)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E8W6_9ACTN
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_5516918_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19743..20087)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E8X4_9ACTN
permease
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_5516918_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20106..20813
DNA (708bp) protein (236aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Trehalose-phosphatase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2V2_CONWI
trehalose-phosphatase
H3-16-all-fractions_k255_5516918_25
unknown

Not on your lists

comp(20799..22205)
DNA (1407bp) protein (469aa)

This feature has no annotations

H3-16-all-fractions_k255_5516918_26
Atopobium sp. oral taxon 199, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22246..22959)
DNA (714bp) protein (238aa)
Two-component system, LytT family, response regulator n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S2ZPH1_9ACTN
Two-component system, LytT family, response regulator {ECO:0000313|EMBL:EPD78683.1}; TaxID=1203602 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral taxon 199 str. F0494.;"
DNA-binding response regulator
H3-16-all-fractions_k255_5516918_27
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(22956..24017)
DNA (1062bp) protein (354aa)
Sensor protein lyts n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TE51_HELMI
lytS; sensor protein lyts
Tax=BJP_IG2102_Coriobacteriales_64_17
H3-16-all-fractions_k255_5516918_28
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24081..24416)
DNA (336bp) protein (112aa)
GCN5-related N-acetyltransferase n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BV61_XYLCX
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACZ31300.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
H3-16-all-fractions_k255_5516918_29

Not on your lists

comp(24536..25171)
DNA (636bp) protein (212aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZY2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKN61200.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
haloacid dehalogenase domain-containing protein hydrolase
H3-16-all-fractions_k255_5516918_30
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25168..26451)
DNA (1284bp) protein (428aa)
Aromatic amino acid decarboxylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ACA2_GEMAT
aromatic amino acid decarboxylase
Tax=GWC2_Gemmatimonadetes_71_10_curated
Displaying items 1-30 of 67 in total

View Taxonomy