ggKbase home page

H3-16-all-fractions_k255_6546788

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_6546788_1
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..1169
DNA (1167bp) protein (389aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
sulfate adenylyltransferase, large subunit (EC:2.7.7.4)
sulfate adenylyltransferase n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000376F101
H3-16-all-fractions_k255_6546788_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1166..2032
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0K5_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB53939.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H3-16-all-fractions_k255_6546788_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2111..3025
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBG3_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_6546788_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3022..4464
DNA (1443bp) protein (481aa)
O-antigen polymerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCD9_CONWI
O-antigen polymerase
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_6546788_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4461..5096
DNA (636bp) protein (212aa)
LmbE family protein id=3692283 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
LmbE family protein
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_6546788_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5111..6289)
DNA (1179bp) protein (393aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3K6_CONWI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB52371.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H3-16-all-fractions_k255_6546788_7
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6296..7336)
DNA (1041bp) protein (347aa)
Maltose operon transcriptional repressor n=2 Tax=Saccharopolyspora erythraea RepID=A4FAB1_SACEN
malR; maltose operon transcriptional repressor
Maltose operon transcriptional repressor {ECO:0000313|EMBL:CAM00986.1}; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
H3-16-all-fractions_k255_6546788_8

Not on your lists

7444..8736
DNA (1293bp) protein (431aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=A8ZR53_DEIGD
Uncharacterized protein {ECO:0000313|EMBL:KGA18538.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
sugar ABC transporter periplasmic protein
H3-16-all-fractions_k255_6546788_9
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

8903..9748
DNA (846bp) protein (282aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BIP0_MEISD
extracellular solute-binding protein family 1
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADH65232.1}; Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADH65046.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
H3-16-all-fractions_k255_6546788_10

Not on your lists

9733..10578
DNA (846bp) protein (282aa)
ABC transporter, permease protein n=18 Tax=Gardnerella vaginalis RepID=E3D872_GARV3
Sugar ABC transporter membrane protein {ECO:0000313|EMBL:KGA18536.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
ABC transporter permease
H3-16-all-fractions_k255_6546788_11
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

10575..11966
DNA (1392bp) protein (464aa)
Alpha amylase catalytic region id=1840673 bin=GWB2_Chloroflexi_54_36 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=GWB2_Chloroflexi_54_36_curated
H3-16-all-fractions_k255_6546788_12
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12007..13905
DNA (1899bp) protein (633aa)
Glucoamylase TGA n=1 Tax=Desmospora sp. 8437 RepID=F5SDR2_9BACL
Glucoamylase TGA {ECO:0000313|EMBL:EGK12858.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
glycosyl hydrolase family protein
H3-16-all-fractions_k255_6546788_13
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13902..15116)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00036DB1B4
Major facilitator transporter {ECO:0000313|EMBL:EME52500.1}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
putative MFS transporter
H3-16-all-fractions_k255_6546788_14
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15113..15655)
DNA (543bp) protein (181aa)
Regulatory protein, ArsR n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R285_STRVP
DNA-binding protein {ECO:0000313|EMBL:EWM64412.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
regulatory protein, ArsR
H3-16-all-fractions_k255_6546788_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15798..16700)
DNA (903bp) protein (301aa)
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_6546788_16
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(16815..17504)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000365B7B4
response regulator receiver and unknown domain-containing protein
Tax=RBG_16_RIF_CHLX_70_13_curated
H3-16-all-fractions_k255_6546788_17
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17501..19114)
DNA (1614bp) protein (538aa)
Signal transduction histidine kinase regulating citrate/malate metabolism n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AVS4_STRRD
signal transduction histidine kinase regulating citrate/malate metabolism
Signal transduction histidine kinase regulating citrate/malate metabolism {ECO:0000313|EMBL:ACZ90720.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
H3-16-all-fractions_k255_6546788_18
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

19260..20111
DNA (852bp) protein (284aa)
ABC transporter related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4U0_9CHLR
ABC transporter related protein {ECO:0000313|EMBL:EFH81520.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
sulfonate/nitrate/taurine ABC transporter ATPase
H3-16-all-fractions_k255_6546788_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20104..20946
DNA (843bp) protein (281aa)
ABC-type nitrate/sulfonate/bicarbonate transport system permease n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I2V6_AZOC5
nitrate/sulfonate/bicarbonate ABC transporter permease
ABC-type nitrate/sulfonate/bicarbonate transport system permease {ECO:0000313|EMBL:BAF87940.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
H3-16-all-fractions_k255_6546788_20
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20965..22008
DNA (1044bp) protein (348aa)
ABC transporter substrate-binding protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I2E3_9ACTO
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EDY59248.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
ABC transporter substrate-binding protein
H3-16-all-fractions_k255_6546788_21
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22028..23188
DNA (1161bp) protein (387aa)
Putative integral membrane transport protein n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z2T9_STRSW
MFS transporter {ECO:0000313|EMBL:KFF97048.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
transporter
H3-16-all-fractions_k255_6546788_22
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23301..25226)
DNA (1926bp) protein (642aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Superfamily I DNA and RNA helicase-like protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y925_THEBD
superfamily I DNA and RNA helicase-like protein
H3-16-all-fractions_k255_6546788_23
unknown

Not on your lists

25262..25480
DNA (219bp) protein (73aa)

This feature has no annotations

H3-16-all-fractions_k255_6546788_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

25467..26381
DNA (915bp) protein (305aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
H3-16-all-fractions_k255_6546788_25
unknown

Not on your lists

26446..26940
DNA (495bp) protein (165aa)

This feature has no annotations

H3-16-all-fractions_k255_6546788_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(26929..28362)
DNA (1434bp) protein (478aa)
Polysaccharide biosynthesis protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F446_CONWI
polysaccharide biosynthesis protein
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_6546788_27
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28367..29272)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TNU7_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM05578.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
H3-16-all-fractions_k255_6546788_28
MPI_Marinimicrobia_46_47, SAR406, SAR406, Marinimicrobia (Marine group A), Bacteria

Not on your lists

comp(29417..30454)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NS61_HALUD
hypothetical protein
Tax=MPI_Marinimicrobia_46_47
H3-16-all-fractions_k255_6546788_29
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30451..31092)
DNA (642bp) protein (214aa)
GCN5-related N-acetyltransferase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WM70_EGGLE
Uncharacterized protein {ECO:0000313|EMBL:KKE83968.1}; TaxID=1129367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas luteoviolacea S4054.;"
N-acetyltransferase GCN5
H3-16-all-fractions_k255_6546788_30
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31089..32312)
DNA (1224bp) protein (408aa)
ATP-dependent carboxylate-amine ligase domain protein ATP-grasp n=1 Tax=Methylomonas methanica (strain MC09) RepID=F9ZZF1_METMM
ATP-dependent carboxylate-amine ligase domain-containing protein
ATP-dependent carboxylate-amine ligase domain protein ATP-grasp {ECO:0000313|EMBL:AEG02344.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
Displaying items 1-30 of 36 in total

View Taxonomy