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H3-16-all-fractions_k255_7179112_3

Organism: H3-16-all-fractions_metab_conc_32

partial RP 23 / 55 MC: 1 BSCG 29 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(962..1408)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=3 Tax=Amycolatopsis mediterranei RepID=D8I8G4_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 154.0
  • Bit_score: 124
  • Evalue 5.10e-26
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 154.0
  • Bit_score: 124
  • Evalue 1.40e-26
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AEK39961.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 154.0
  • Bit_score: 124
  • Evalue 7.10e-26

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 447
TTGCGTACCGCCTTCCTGCTGACCGGCGACCGCGGCCACGCCGAGGACCTCGTGCAACTCGCGCTAGAGCGGACTGCCCGTCGCTGGTCCGGGCTGGCCGGTTCACCCGAGGCGTTCGCACGGACGGTGCTGCTGCACGCGGCGACCGACCGGTGGCGGCGGCGACGTGCCCGCGCGCAGGAGGTCTTCGACGGTGTCCACGAGTCGTCGATCGCCGACGGTGTGGATCAGCTACTGCTGCGGCGGGATCTTGTCGCAGCGCTGCAACAGTTGCCGTCGCAGCAGCGCACTGCACTCGTGCTCCGATACTTCCTCGACCTGAGCGAGAAGGAAACGGCGCGCGAGCTTGACATCAGCGTCGGAACGGTCAAGTCCGCGGTCAGTCGGGCGCTGGACCGATTGCGCACGCTCGTACCCGCTGACCTCAACCAGGAGGTGCACAGATGA
PROTEIN sequence
Length: 149
LRTAFLLTGDRGHAEDLVQLALERTARRWSGLAGSPEAFARTVLLHAATDRWRRRRARAQEVFDGVHESSIADGVDQLLLRRDLVAALQQLPSQQRTALVLRYFLDLSEKETARELDISVGTVKSAVSRALDRLRTLVPADLNQEVHR*