ggKbase home page

H3-16-all-fractions_k255_7179112

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_7179112_1
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..208
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B6E9F0
Uncharacterized protein {ECO:0000313|EMBL:ETK37714.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
bacteriocin-protection protein
H3-16-all-fractions_k255_7179112_2
unknown

Not on your lists

comp(267..965)
DNA (699bp) protein (233aa)

This feature has no annotations

H3-16-all-fractions_k255_7179112_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(962..1408)
DNA (447bp) protein (149aa)
ECF subfamily RNA polymerase sigma-24 factor n=3 Tax=Amycolatopsis mediterranei RepID=D8I8G4_AMYMU
ECF subfamily RNA polymerase sigma-24 factor
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AEK39961.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
H3-16-all-fractions_k255_7179112_4
unknown

Not on your lists

1862..2392
DNA (531bp) protein (177aa)

This feature has no annotations

H3-16-all-fractions_k255_7179112_5

Not on your lists

comp(2426..3052)
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:AKA49137.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
H3-16-all-fractions_k255_7179112_6
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3088..4299
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Saccharomonospora halophila RepID=UPI0003787F15
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:KID29916.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
gulo; FAD-linked oxidoreductase
H3-16-all-fractions_k255_7179112_7
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4304..4804
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H3K6_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:KFE63274.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
H3-16-all-fractions_k255_7179112_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4846..5469
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003642859
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87490.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
H3-16-all-fractions_k255_7179112_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5533..6135
DNA (603bp) protein (201aa)
gst; glutathione S-transferase (EC:2.5.1.18)
Glutathione S-transferase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QKQ5_9CYAN
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_7179112_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6132..7397)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWK1_ROSS1
Beta-xylosidase
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_7179112_11
unknown

Not on your lists

7503..7775
DNA (273bp) protein (91aa)

This feature has no annotations

H3-16-all-fractions_k255_7179112_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7936..8640)
DNA (705bp) protein (235aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAI5_CONWI
H3-16-all-fractions_k255_7179112_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8637..8879)
DNA (243bp) protein (81aa)
phosphoribosylformylglycinamidine synthase n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B30105
phosphoribosylformylglycinamidine synthase PurS
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_7179112_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8910..9773)
DNA (864bp) protein (288aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Frankia sp. QA3 RepID=I9KLS1_9ACTO
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_7179112_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9766..11091)
DNA (1326bp) protein (442aa)
adenylosuccinate lyase n=1 Tax=Laceyella sacchari RepID=UPI0003B6ACF3
purB; adenylosuccinate lyase
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_7179112_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11113..11535)
DNA (423bp) protein (141aa)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAH2_CONWI
H3-16-all-fractions_k255_7179112_17
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11528..12772)
DNA (1245bp) protein (415aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
Phosphoribosylamine--glycine ligase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67KG4_SYMTH
phosphoribosylamine--glycine ligase
H3-16-all-fractions_k255_7179112_18
unknown

Not on your lists

12781..13116
DNA (336bp) protein (112aa)

This feature has no annotations

H3-16-all-fractions_k255_7179112_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13131..13910
DNA (780bp) protein (260aa)
Protein FdhD homolog n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFJ1_CONWI
formate dehydrogenase family accessory protein FdhD
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H3-16-all-fractions_k255_7179112_20
Planococcus antarcticus, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13921..14442
DNA (522bp) protein (174aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=1185653 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus antarcticus DSM 14505.;"
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Planococcus antarcticus DSM 14505 RepID=I4X0I2_9BACL
formate dehydrogenase family accessory protein FdhD
H3-16-all-fractions_k255_7179112_21
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14442..14906
DNA (465bp) protein (155aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0IYM1_9EURY
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:EMA01173.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 35960.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
H3-16-all-fractions_k255_7179112_22
unknown

Not on your lists

comp(14903..15100)
DNA (198bp) protein (66aa)

This feature has no annotations

H3-16-all-fractions_k255_7179112_23

Not on your lists

comp(15097..16350)
DNA (1254bp) protein (418aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Frankia sp. EUN1f RepID=D3D3U8_9ACTO
Adenylosuccinate synthetase {ECO:0000313|EMBL:KGA15497.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
H3-16-all-fractions_k255_7179112_24
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16376..17311)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00037CE92A
putative phosphate transporter
Putative phosphate transporter {ECO:0000313|EMBL:BAJ80164.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
H3-16-all-fractions_k255_7179112_25
unknown

Not on your lists

comp(17308..17523)
DNA (216bp) protein (72aa)

This feature has no annotations

H3-16-all-fractions_k255_7179112_26
unknown

Not on your lists

comp(17549..17803)
DNA (255bp) protein (85aa)

This feature has no annotations

H3-16-all-fractions_k255_7179112_27
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17800..19158)
DNA (1359bp) protein (453aa)
Replicative DNA helicase n=1 Tax=Thermincola potens (strain JR) RepID=D5XDQ5_THEPJ
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:ADG83801.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
H3-16-all-fractions_k255_7179112_28
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19396..20772)
DNA (1377bp) protein (459aa)
Single-stranded DNA-binding protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E9H1_9ACTN
single-strand binding protein
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_7179112_29
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(20805..21203)
DNA (399bp) protein (133aa)
30S ribosomal protein S6 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXR2_RUBXD
30S ribosomal protein S6
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_7179112_30
unknown

Not on your lists

21314..21601
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying items 1-30 of 111 in total

View Taxonomy