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H3-16-all-fractions_k255_4716057_22

Organism: H3-16-all-fractions_metab_conc_32

partial RP 23 / 55 MC: 1 BSCG 29 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(21837..22316)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, RpoE id=3190063 bin=GWF2_Lentisphaerae_50_93 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 178.0
  • Bit_score: 84
  • Evalue 1.10e-13
putative RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 154.0
  • Bit_score: 77
  • Evalue 2.80e-12
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 159.0
  • Bit_score: 133
  • Evalue 2.10e-28

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGCTGCTTCCCCCGCCGCGATCGAGGAGCTCTATCGTGCCCGCTTCGACGTCTTCCGCAACGTCCTCTCCGGCGTCGTCTCGAGCCGGGAGTCGGCGCGTGAGGTCGTCCAGGAGGCTTTCGCCCGCGCGCTTCGCGACCGCAGGAAGTACCGCGGCGACGGCTCGCTGGAGGCGTGGGTCTGGCGCATCGCGCTCAACCAGGCCTTCAAGGACCGGCGCGCGCGCCGGGACGAGTGGGAGCTCGACGAGGAGCCGGCGGCGGAGGCGTTCGGCTTCGCGGACGACGACGTGCGCGACGCGATCCGCGCGCTTCCACCGCGCCGGCGGCTCGTCGTCTTCCTGCGGTACTTCGCCGACCTCTCCTACGCGGAGATCGCCGGCATCTGCGACGTCTCGGAGGGAACCGTCGCGGCGACGCTCTCGCAGTCGCATGCAGAGCTGTCGCGTCACCTGGCACCGGAGGGAGCAAGAGGATGA
PROTEIN sequence
Length: 160
MAASPAAIEELYRARFDVFRNVLSGVVSSRESAREVVQEAFARALRDRRKYRGDGSLEAWVWRIALNQAFKDRRARRDEWELDEEPAAEAFGFADDDVRDAIRALPPRRRLVVFLRYFADLSYAEIAGICDVSEGTVAATLSQSHAELSRHLAPEGARG*