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H3-16-all-fractions_k255_4716057

Search features with annotation key words

Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4716057_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1..621)
DNA (621bp) protein (207aa)
Succinate dehydrogenase, Fe-S protein subunit n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YNE9_9BACT
putative succinate dehydrogenase iron-sulfur protein
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_4716057_2
unknown

Not on your lists

846..1319
DNA (474bp) protein (158aa)

This feature has no annotations

H3-16-all-fractions_k255_4716057_3
unknown

Not on your lists

1508..1942
DNA (435bp) protein (145aa)

This feature has no annotations

H3-16-all-fractions_k255_4716057_4
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2024..4561)
DNA (2538bp) protein (846aa)
Uncharacterized protein {ECO:0000313|EMBL:EWT00075.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
H3-16-all-fractions_k255_4716057_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4784..5467
DNA (684bp) protein (228aa)
LuxR family DNA-binding response regulator n=1 Tax=Thauera sp. 28 RepID=N6YEF0_9RHOO
two component signal transduction system response regulator LuxR family
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_4716057_6
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5464..7149)
DNA (1686bp) protein (562aa)
sdhA; succinate dehydrogenase/fumarate reductase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit id=4850825 bin=GWC2_Deltaproteobacteria_56_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
Tax=GWC2_Deltaproteobacteria_42_11_curated
H3-16-all-fractions_k255_4716057_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7220..7951)
DNA (732bp) protein (244aa)
High-affinity nickel-transporter n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZT9_RUBXD
high-affinity nickel-transporter
High-affinity nickel-transporter {ECO:0000313|EMBL:ABG03089.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
H3-16-all-fractions_k255_4716057_8
Thermus sp. CCB_US3_UF1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(7971..9626)
DNA (1656bp) protein (552aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1111069 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. CCB_US3_UF1.;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8NDQ3_9DEIN
Phosphoenolpyruvate carboxykinase [ATP] 2
H3-16-all-fractions_k255_4716057_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9730..10926)
DNA (1197bp) protein (399aa)
Peptidase M29 aminopeptidase II n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFD9_CONWI
peptidase M29 aminopeptidase II
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:ADB53732.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H3-16-all-fractions_k255_4716057_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10966..11805
DNA (840bp) protein (280aa)
Tyrosine recombinase XerC n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1B9_CONWI
integrase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
H3-16-all-fractions_k255_4716057_11
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11786..12790
DNA (1005bp) protein (335aa)
Tyrosine recombinase XerD n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKQ0_THEM7
tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
H3-16-all-fractions_k255_4716057_12
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(12851..13651)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI00034A98F4
hypothetical protein
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
H3-16-all-fractions_k255_4716057_13
unknown

Not on your lists

comp(13726..14217)
DNA (492bp) protein (164aa)

This feature has no annotations

H3-16-all-fractions_k255_4716057_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14214..15338)
DNA (1125bp) protein (375aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLW3_THEM7
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-16-all-fractions_k255_4716057_15
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15335..16432)
DNA (1098bp) protein (366aa)
Citrate synthase {ECO:0000313|EMBL:AAZ54285.1}; EC=2.3.3.1 {ECO:0000313|EMBL:AAZ54285.1};; TaxID=269800 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
citrate synthase 2 (EC:2.3.3.1)
citrate synthase n=1 Tax=Sporichthya polymorpha RepID=UPI000371AE4D
H3-16-all-fractions_k255_4716057_16
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(16481..17197)
DNA (717bp) protein (239aa)
Putative Peptidase S1 and S6, chymotrypsin n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1CZT6_DEIDV
peptidase S1 and S6, chymotrypsin
Putative Peptidase S1 and S6, chymotrypsin {ECO:0000313|EMBL:ACO45188.1}; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923).;"
H3-16-all-fractions_k255_4716057_17
unknown

Not on your lists

comp(17197..17322)
DNA (126bp) protein (42aa)

This feature has no annotations

H3-16-all-fractions_k255_4716057_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(17343..18500)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TF12_9CYAN
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_4716057_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

18626..19714
DNA (1089bp) protein (363aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.41)
Isocitrate dehydrogenase (NADP) n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ESB2_9BACT
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_4716057_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

19711..20640
DNA (930bp) protein (310aa)
Malate dehydrogenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TF91_9CHLR
malate dehydrogenase, NAD-dependent
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_4716057_21
unknown

Not on your lists

comp(20650..21840)
DNA (1191bp) protein (397aa)

This feature has no annotations

H3-16-all-fractions_k255_4716057_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21837..22316)
DNA (480bp) protein (160aa)
RNA polymerase, sigma-24 subunit, RpoE id=3190063 bin=GWF2_Lentisphaerae_50_93 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
putative RNA polymerase ECF-subfamily sigma factor
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_4716057_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

22372..23118
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036D9B09
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_4716057_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

23115..24116
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Halobacillus sp. BAB-2008 RepID=L5N4P4_9BACI
ylbL; hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_4716057_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

24433..24666
DNA (234bp) protein (78aa)
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_4716057_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(24637..25704)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000373A620
class I and II aminotransferase
Tax=RBG_16_Actinobacteria_68_12_curated
H3-16-all-fractions_k255_4716057_27
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25879..27585)
DNA (1707bp) protein (569aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034BC183
Histidine kinase {ECO:0000313|EMBL:KKB79338.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
two-component system sensor kinase
H3-16-all-fractions_k255_4716057_28
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

27667..28341
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Patulibacter americanus RepID=UPI0003B30CFD
two component transcriptional regulator
Putative two-component system response regulator {ECO:0000313|EMBL:EHN09015.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
H3-16-all-fractions_k255_4716057_29
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

28338..29603
DNA (1266bp) protein (422aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5Z0_CONWI
integral membrane sensor signal transduction histidine kinase
Tax=RBG_16_Actinobacteria_67_10_curated
H3-16-all-fractions_k255_4716057_30
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29629..30834
DNA (1206bp) protein (402aa)
MFS transporter n=1 Tax=Salinispora pacifica RepID=UPI000382CE53
Uncharacterized protein {ECO:0000313|EMBL:KKA42248.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
major facilitator transporter
Displaying items 1-30 of 43 in total

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