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H3-16-all-fractions_k255_570471

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_570471_1
unknown

Not on your lists

comp(1..168)
DNA (168bp) protein (56aa)

This feature has no annotations

H3-16-all-fractions_k255_570471_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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394..2361
DNA (1968bp) protein (656aa)
Putative metal-dependent phosphohydrolase n=1 Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NME4_9BACT
Diguanylate cyclase (GGDEF) domain/uncharacterized domain HDIG-containing protein {ECO:0000313|EMBL:CDM64990.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative metal-dependent phosphohydrolase
H3-16-all-fractions_k255_570471_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2664..3782
DNA (1119bp) protein (373aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pdhA; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component, alpha subunit n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFX7_9BACT
H3-16-all-fractions_k255_570471_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3779..4777
DNA (999bp) protein (333aa)
TonB family C-terminal domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGE2_CHLTF
TonB family protein {ECO:0000313|EMBL:CDM64995.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB family C-terminal domain-containing protein
H3-16-all-fractions_k255_570471_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4833..5816
DNA (984bp) protein (328aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit {ECO:0000313|EMBL:CDM64988.1}; EC=1.2.4.1 {ECO:0000313|EMBL:CDM64988.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pdhB; Pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
pyruvate dehydrogenase subunit beta n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI00036C919C
H3-16-all-fractions_k255_570471_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5930..7387
DNA (1458bp) protein (486aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00037EFCC8
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
H3-16-all-fractions_k255_570471_7
unknown

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7406..7606
DNA (201bp) protein (67aa)

This feature has no annotations

H3-16-all-fractions_k255_570471_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7607..8548
DNA (942bp) protein (314aa)
Putative permease n=1 Tax=uncultured bacterium BAC-L1N9 RepID=Q4JIR4_9BACT
Predicted permease, DMT superfamily {ECO:0000313|EMBL:CDM64986.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transmembrane permease
H3-16-all-fractions_k255_570471_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

8577..9491
DNA (915bp) protein (305aa)
Cobalt-zinc-cadmium resistance protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MD54_PSEPS
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CDM64985.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
iron transporter
H3-16-all-fractions_k255_570471_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9566..12175)
DNA (2610bp) protein (870aa)
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
deb:DehaBAV1_1029 DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS id=1242126 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
DNA mismatch repair protein MutS
H3-16-all-fractions_k255_570471_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12172..12903)
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM64983.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-16-all-fractions_k255_570471_12
unknown

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comp(13105..13245)
DNA (141bp) protein (47aa)

This feature has no annotations

H3-16-all-fractions_k255_570471_13
Loa loa, Loa, Spirurida, Chromadorea, Nematoda, Metazoa

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comp(13242..13622)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Loa loa RepID=E1GKS9_LOALO
Uncharacterized protein {ECO:0000313|EMBL:EFO14730.1}; TaxID=7209 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Loa.;" source="Loa loa (Eye worm) (Filaria loa).;"
hypothetical protein
H3-16-all-fractions_k255_570471_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14095..15882)
DNA (1788bp) protein (596aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIF4_SORCE
hflB; ATP-dependent metalloprotease
H3-16-all-fractions_k255_570471_15
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16467..16637)
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
H3-16-all-fractions_k255_570471_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(16634..17413)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YI1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85284.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_570471_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

17649..18023
DNA (375bp) protein (125aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZR2_SOLUE
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABJ84853.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_570471_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(18113..18976)
DNA (864bp) protein (288aa)
Biotin/lipoyl attachment domain-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VB4_SOLUE
biotin/lipoyl attachment domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
H3-16-all-fractions_k255_570471_19
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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comp(19003..19431)
DNA (429bp) protein (143aa)
Putative uncharacterized protein id=5017094 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
membrane protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
H3-16-all-fractions_k255_570471_20
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19432..19833)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Burkholderia cepacia GG4 RepID=J7JGV8_BURCE
Ketosteroid isomerase {ECO:0000313|EMBL:KJE51478.1}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. USM B20.;"
hypothetical protein
H3-16-all-fractions_k255_570471_21
unknown

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comp(19830..20069)
DNA (240bp) protein (80aa)

This feature has no annotations

H3-16-all-fractions_k255_570471_22
unknown

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comp(20098..20364)
DNA (267bp) protein (89aa)

This feature has no annotations

H3-16-all-fractions_k255_570471_23
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(20377..20991)
DNA (615bp) protein (205aa)
Caa(3)-type oxidase, subunit IV n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UX5_SOLUE
caa(3)-type oxidase subunit IV
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
H3-16-all-fractions_k255_570471_24
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(21007..21675)
DNA (669bp) protein (223aa)
Cytochrome c oxidase, subunit III n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UX6_SOLUE
cytochrome c oxidase subunit III
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
H3-16-all-fractions_k255_570471_25
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(21680..22276)
DNA (597bp) protein (199aa)
Cytochrome c oxidase, subunit III n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UX7_SOLUE
cytochrome c oxidase subunit III
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Displaying 25 items

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