ggKbase home page

H3-16-all-fractions_k255_1426252

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_1426252_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

1..339
DNA (339bp) protein (113aa)
hypothetical protein id=14622923 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
H3-16-all-fractions_k255_1426252_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(459..1892)
DNA (1434bp) protein (478aa)
Amino acid transporter n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHF3_CHLTF
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM67062.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
amino acid transporter
H3-16-all-fractions_k255_1426252_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1920..3332)
DNA (1413bp) protein (471aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
diaminopimelate decarboxylase (EC:4.1.1.20)
Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein n=1 Tax=Shigella flexneri 1235-66 RepID=I6GZN5_SHIFL
H3-16-all-fractions_k255_1426252_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3421..4590
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7A3AB
Selenocysteine lyase {ECO:0000313|EMBL:CDM67064.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative cysteine desulfurase/selenocysteine lyase
H3-16-all-fractions_k255_1426252_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5341..5643
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZER8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM65549.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-16-all-fractions_k255_1426252_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5634..6098)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026E8_SOLUE
putative protein family UPF0066
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
H3-16-all-fractions_k255_1426252_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6768..8309)
DNA (1542bp) protein (514aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INU1_KORVE
glycine dehydrogenase subunit 2
H3-16-all-fractions_k255_1426252_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8306..9547)
DNA (1242bp) protein (414aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycine dehydrogenase subunit alpha (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 id=4385686 bin=GWC2_Pelobacter_58_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Displaying 8 items

View Taxonomy