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H3-16-all-fractions_k255_3015150

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_3015150_1

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comp(1..756)
DNA (756bp) protein (252aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Release factor glutamine methyltransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIZ9_SYNFM
HemK family modification methylase
H3-16-all-fractions_k255_3015150_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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935..1174
DNA (240bp) protein (80aa)
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8CWJ3_THETY
Copper chaperone {ECO:0000313|EMBL:CDM67009.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
copper-translocating P-type ATPase
H3-16-all-fractions_k255_3015150_3
unknown

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1167..1427
DNA (261bp) protein (87aa)

This feature has no annotations

H3-16-all-fractions_k255_3015150_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1549..2463
DNA (915bp) protein (305aa)
Serine O-acetyltransferase {ECO:0000313|EMBL:CDM67010.1}; EC=2.3.1.30 {ECO:0000313|EMBL:CDM67010.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z234_DESAT
H3-16-all-fractions_k255_3015150_5
unknown

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2605..3528
DNA (924bp) protein (308aa)

This feature has no annotations

H3-16-all-fractions_k255_3015150_6

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3759..4124
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA16031.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
H3-16-all-fractions_k255_3015150_7

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4500..5672
DNA (1173bp) protein (391aa)
DegP2 peptidase (EC:3.4.21.-)
DegP2 peptidase, Serine peptidase, MEROPS family S01B n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ18_CHLTF
Trypsin-like peptidase domain protein {ECO:0000313|EMBL:AIA16101.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
H3-16-all-fractions_k255_3015150_8
unknown

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5774..6019
DNA (246bp) protein (82aa)

This feature has no annotations

H3-16-all-fractions_k255_3015150_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6005..6697)
DNA (693bp) protein (231aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09BP6_STIAD
H3-16-all-fractions_k255_3015150_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6846..7931
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QU2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87978.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_3015150_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(8028..8318)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65827.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-16-all-fractions_k255_3015150_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8504..8959)
DNA (456bp) protein (152aa)
Cyclase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRX1_SORCE
cyclase
Cyclase {ECO:0000313|EMBL:AGP34635.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
H3-16-all-fractions_k255_3015150_13

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9210..10088
DNA (879bp) protein (293aa)
Putative cobalamin binding protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGI2_CHLTF
B12 binding domain protein {ECO:0000313|EMBL:AIA10965.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative cobalamin binding protein
H3-16-all-fractions_k255_3015150_14

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10141..10722
DNA (582bp) protein (194aa)
Cysteine dioxygenase (CDO1) {ECO:0000313|EMBL:AIF13143.1}; EC=1.13.11.20 {ECO:0000313|EMBL:AIF13143.1};; TaxID=1456468 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_60_A09.;"
hypothetical protein n=1 Tax=Vibrio coralliilyticus RepID=UPI0002EEF5D8
hypothetical protein
H3-16-all-fractions_k255_3015150_15
unknown

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comp(10744..11700)
DNA (957bp) protein (319aa)

This feature has no annotations

H3-16-all-fractions_k255_3015150_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(11728..13140)
DNA (1413bp) protein (471aa)
Uncharacterized conserved protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI49_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM67043.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-16-all-fractions_k255_3015150_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13240..16383)
DNA (3144bp) protein (1048aa)
TonB-dependent receptor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITL2_KORVE
Outer membrane receptor protein {ECO:0000313|EMBL:CDM64840.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
TonB-dependent receptor
H3-16-all-fractions_k255_3015150_18
unknown

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comp(16660..17331)
DNA (672bp) protein (224aa)

This feature has no annotations

H3-16-all-fractions_k255_3015150_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(17343..18533)
DNA (1191bp) protein (397aa)
Sporulation protein YhbH n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIB8_CHLTF
Sporulation protein YhbH {ECO:0000313|EMBL:CDM67042.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sporulation protein YhbH
H3-16-all-fractions_k255_3015150_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18624..20564)
DNA (1941bp) protein (647aa)
Putative Ser protein kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFU6_CHLTF
Putative serine protein kinase, PrkA {ECO:0000313|EMBL:CDM67041.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative Ser protein kinase
H3-16-all-fractions_k255_3015150_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20861..21787)
DNA (927bp) protein (309aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034C4FF8
tRNA pseudouridine synthase B
H3-16-all-fractions_k255_3015150_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

21850..22449
DNA (600bp) protein (200aa)
Regulatory protein RecX n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MSQ7_9BACT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-16-all-fractions_k255_3015150_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


22677..23522
DNA (846bp) protein (282aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDW5_CHLTF
Displaying 23 items

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