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H3-16-all-fractions_k255_4126995

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4126995_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3..1187
DNA (1185bp) protein (395aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
fumarase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZ34_ISOPI
H3-16-all-fractions_k255_4126995_2
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

1359..2489
DNA (1131bp) protein (377aa)
Quinolinate synthase A n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIL3_9CHLR
quinolinate synthetase complex subunit A
Tax=RBG_16_Chloroflexi_68_14_curated
H3-16-all-fractions_k255_4126995_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

2563..2793
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF49_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP12977.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
H3-16-all-fractions_k255_4126995_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2875..3231)
DNA (357bp) protein (119aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:CDM67097.1}; EC=1.7.1.4 {ECO:0000313|EMBL:CDM67097.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Dioxygenase, ferredoxin subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG05_9BACT
dioxygenase, ferredoxin subunit
H3-16-all-fractions_k255_4126995_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3352..4413
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037B7391
Uncharacterized protein {ECO:0000313|EMBL:CDM67096.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-16-all-fractions_k255_4126995_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4626..5468
DNA (843bp) protein (281aa)
CBS domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXZ8_CORCM
CBS-domain-containing membrane protein {ECO:0000313|EMBL:CDM67095.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
yhcV2; hypothetical protein
H3-16-all-fractions_k255_4126995_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5568..5909
DNA (342bp) protein (114aa)
Heat shock protein Hsp20 n=2 Tax=Nitrosococcus oceani RepID=Q3JBB5_NITOC
Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:CDM67094.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
heat shock protein Hsp20
H3-16-all-fractions_k255_4126995_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

5964..8561
DNA (2598bp) protein (866aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCJ0_9BACT
H3-16-all-fractions_k255_4126995_9
unknown

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8594..8914
DNA (321bp) protein (107aa)

This feature has no annotations

H3-16-all-fractions_k255_4126995_10
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9219..11678)
DNA (2460bp) protein (820aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFP6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM75297.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
beta-lactamase
H3-16-all-fractions_k255_4126995_11
unknown

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comp(11814..12185)
DNA (372bp) protein (124aa)

This feature has no annotations

H3-16-all-fractions_k255_4126995_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12335..12862)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AYM6_HERA2
AP2 domain-containing protein {ECO:0000313|EMBL:CDM64781.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-16-all-fractions_k255_4126995_13
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(13024..14190)
DNA (1167bp) protein (389aa)
2-oxoacid:acceptor oxidoreductase subunit beta (EC:1.2.7.3)
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKX3_CHLTF
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:BAL58154.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
H3-16-all-fractions_k255_4126995_14
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(14230..16098)
DNA (1869bp) protein (623aa)
Pyruvate:ferredoxin oxidoreductase-like 2-oxoacid:ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR9_9BACT
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:BAL58155.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
H3-16-all-fractions_k255_4126995_15
unknown

Not on your lists

16486..17730
DNA (1245bp) protein (415aa)

This feature has no annotations

H3-16-all-fractions_k255_4126995_16
unknown

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comp(17817..18224)
DNA (408bp) protein (136aa)

This feature has no annotations

H3-16-all-fractions_k255_4126995_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18332..20857)
DNA (2526bp) protein (842aa)
Putative YD repeat protein n=1 Tax=Streptomyces viridochromogenes Tue57 RepID=L8P4C3_STRVR
Rhs family protein {ECO:0000313|EMBL:CDM66045.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
YD repeat protein
H3-16-all-fractions_k255_4126995_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(21570..22334)
DNA (765bp) protein (255aa)
Integral membrane protein CcmA involved in cell shape determination n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C9W5_DESTA
Integral membrane protein CcmA involved in cell shape determination {ECO:0000313|EMBL:CDM64074.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Integral membrane protein CcmA involved in cell shape determination
H3-16-all-fractions_k255_4126995_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22797..22892
DNA (96bp) protein (32aa)
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:CDM66530.1}; EC=3.1.1.45 {ECO:0000313|EMBL:CDM66530.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Displaying 19 items

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