ggKbase home page

H3-16-all-fractions_k255_4240990

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4240990_1

Not on your lists

comp(3..200)
DNA (198bp) protein (66aa)
RF-1 domain protein {ECO:0000313|EMBL:AIA12110.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative peptide chain release factor 2 id=4237195 bin=GWC2_Nitrospirae_57_13 species=Candidatus Protochlamydia amoebophila genus=Candidatus Protochlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
rf-2; peptide chain release factor 2
H3-16-all-fractions_k255_4240990_2
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(218..2929)
DNA (2712bp) protein (904aa)
PAS domain S-box n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TRQ5_9CYAN
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AFY85235.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
H3-16-all-fractions_k255_4240990_3
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3000..4037)
DNA (1038bp) protein (346aa)
CheB methylesterase {ECO:0000313|EMBL:EGK86470.1}; EC=3.1.1.61 {ECO:0000313|EMBL:EGK86470.1};; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
CheB methylesterase n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UJM1_9CYAN
CheB methylesterase
H3-16-all-fractions_k255_4240990_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4246..8013
DNA (3768bp) protein (1256aa)
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSE0_DYAFD
MCP methyltransferase/methylesterase
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor {ECO:0000313|EMBL:ACT96375.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
H3-16-all-fractions_k255_4240990_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8010..8657
DNA (648bp) protein (216aa)
LuxR family transcriptional regulator n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A9D
LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
H3-16-all-fractions_k255_4240990_6
RIFOXYB12_FULL_Gallionellales_54_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9034..9477
DNA (444bp) protein (148aa)
Response regulator receiver domain n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LX63_SYNAS
response regulator receiver domain-containing protein
Tax=RIFOXYB12_FULL_Gallionellales_54_9_curated
H3-16-all-fractions_k255_4240990_7
unknown

Not on your lists

9532..9885
DNA (354bp) protein (118aa)

This feature has no annotations

H3-16-all-fractions_k255_4240990_8
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9959..10774
DNA (816bp) protein (272aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XGE2_9CHRO
transcriptional regulator, Crp/Fnr family
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AFZ31710.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
H3-16-all-fractions_k255_4240990_9
unknown

Not on your lists

comp(10877..11272)
DNA (396bp) protein (132aa)

This feature has no annotations

H3-16-all-fractions_k255_4240990_10
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11345..13156)
DNA (1812bp) protein (604aa)
Nudix hydrolase 3 protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TUT2_9DELT
Nudix hydrolase 3 protein {ECO:0000313|EMBL:ERK89224.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
hypothetical protein
H3-16-all-fractions_k255_4240990_11
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

13454..16828
DNA (3375bp) protein (1125aa)
peptidase S41; K08676 tricorn protease [EC:3.4.21.-] id=24533540 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase S41
Tax=RBG_13_Aminicenantes_63_10_curated
Displaying 11 items

View Taxonomy