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H3-16-all-fractions_k255_4317746

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4317746_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2..826)
DNA (825bp) protein (275aa)
Cell division protein FtsW {ECO:0000313|EMBL:CDM67082.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
stage V sporulation protein E; K03588 cell division protein FtsW id=14625505 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
cell cycle protein
H3-16-all-fractions_k255_4317746_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(863..2272)
DNA (1410bp) protein (470aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFK1_CHLTF
H3-16-all-fractions_k255_4317746_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2279..3439)
DNA (1161bp) protein (387aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFK2_CHLTF
H3-16-all-fractions_k255_4317746_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3522..4973)
DNA (1452bp) protein (484aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFK3_CHLTF
H3-16-all-fractions_k255_4317746_5
unknown

Not on your lists

comp(5075..5236)
DNA (162bp) protein (54aa)

This feature has no annotations

H3-16-all-fractions_k255_4317746_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5404..7395)
DNA (1992bp) protein (664aa)
Peptidoglycan synthetase FtsI {ECO:0000313|EMBL:CDM67077.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CDM67077.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Peptidoglycan synthetase FtsI n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKG4_KORVE
peptidoglycan glycosyltransferase
H3-16-all-fractions_k255_4317746_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7640..8035)
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM67076.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-16-all-fractions_k255_4317746_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8132..9088)
DNA (957bp) protein (319aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RSMH_MOOTA
methyltransferase
H3-16-all-fractions_k255_4317746_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(9217..9660)
DNA (444bp) protein (148aa)
Protein MraZ n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=MRAZ_ACIC5
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
MraZ protein
H3-16-all-fractions_k255_4317746_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9961..10752
DNA (792bp) protein (264aa)
Zinc/iron transporter n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LHK3_9BACT
Predicted divalent heavy-metal cations transporter {ECO:0000313|EMBL:CDM67073.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Zinc/iron transporter
H3-16-all-fractions_k255_4317746_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10839..11759
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EWI4_PSEST
Beta-propeller domain-containing protein, methanol dehydrogenase {ECO:0000313|EMBL:CDM67072.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
methanol dehydrogenase
H3-16-all-fractions_k255_4317746_12

Not on your lists

11845..12585
DNA (741bp) protein (247aa)
Protein containing Nucleotidyltransferase domain n=1 Tax=sediment metagenome RepID=D9PN17_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AIA13011.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
H3-16-all-fractions_k255_4317746_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

12643..13281
DNA (639bp) protein (213aa)
LemA family protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z775_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CDM67070.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-16-all-fractions_k255_4317746_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13418..13885)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM67069.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-16-all-fractions_k255_4317746_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13896..14180)
DNA (285bp) protein (95aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67068.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml id=12554590 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
H3-16-all-fractions_k255_4317746_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14177..14464)
DNA (288bp) protein (96aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C81_SOLUE
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67067.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
H3-16-all-fractions_k255_4317746_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14467..14739)
DNA (273bp) protein (91aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C82_SOLUE
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67066.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
H3-16-all-fractions_k255_4317746_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(14864..15148)
DNA (285bp) protein (95aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:CDM67065.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
microcompartments protein id=12554589 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
microcompartments protein
H3-16-all-fractions_k255_4317746_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15194..16024)
DNA (831bp) protein (277aa)
Ribulose-5-phosphate 4-epimerase-like epimerase or aldolase {ECO:0000313|EMBL:CDM64466.1}; EC=4.1.2.17 {ECO:0000313|EMBL:CDM64466.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
class II aldolase/adducin family protein id=12554588 bin=CNBR_ACIDO species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
class II aldolase/adducin family protein
H3-16-all-fractions_k255_4317746_20
unknown

Not on your lists

comp(16044..16517)
DNA (474bp) protein (158aa)

This feature has no annotations

H3-16-all-fractions_k255_4317746_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16532..17401)
DNA (870bp) protein (290aa)
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rex; redox-sensing transcriptional repressor rex id=12555390 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rex; redox-sensing transcriptional repressor rex
H3-16-all-fractions_k255_4317746_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17466..18086
DNA (621bp) protein (207aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=uncultured bacterium 293 RepID=E3T626_9BACT
ruvA; Holliday junction DNA helicase RuvA
H3-16-all-fractions_k255_4317746_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18168..19217
DNA (1050bp) protein (350aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE51_CHLTF
Holliday junction DNA helicase subunit RuvB
H3-16-all-fractions_k255_4317746_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

19239..21284
DNA (2046bp) protein (682aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65599.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-16-all-fractions_k255_4317746_25
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21399..22322
DNA (924bp) protein (308aa)
Ribonuclease BN n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XLM7_9CHRO
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:AFZ32981.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
H3-16-all-fractions_k255_4317746_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

22412..23470
DNA (1059bp) protein (353aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=QUEA_SYMTH
S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
H3-16-all-fractions_k255_4317746_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

23549..24100
DNA (552bp) protein (184aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDM64472.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CDM64472.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
acetyltransferase (EC:2.3.1.128)
Acetyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJC7_CHLTF
H3-16-all-fractions_k255_4317746_28
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24180..26132)
DNA (1953bp) protein (651aa)
peptidase n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483E11
Uncharacterized protein {ECO:0000313|EMBL:KIG17701.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
H3-16-all-fractions_k255_4317746_29
unknown

Not on your lists

comp(26245..26604)
DNA (360bp) protein (120aa)

This feature has no annotations

Displaying 29 items

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