ggKbase home page

H3-16-all-fractions_k255_5317917

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_5317917_1
unknown

Not on your lists

3..134
DNA (132bp) protein (44aa)

This feature has no annotations

H3-16-all-fractions_k255_5317917_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

307..1200
DNA (894bp) protein (298aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=END4_CHLAD
H3-16-all-fractions_k255_5317917_3
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1202..1462
DNA (261bp) protein (87aa)
Transcriptional regulator, GntR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ92_9BACT
GntR family transcriptional regulator {ECO:0000313|EMBL:KJE35353.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
GntR family transcriptional regulator
H3-16-all-fractions_k255_5317917_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


1741..4404
DNA (2664bp) protein (888aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
leucyl-tRNA synthetase n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037520CE
H3-16-all-fractions_k255_5317917_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4533..5453)
DNA (921bp) protein (307aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DI87_SINAD
DMT(drug/metabolite transporter) superfamily permease
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:AGA28575.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
H3-16-all-fractions_k255_5317917_6
Laccaria amethystina, Laccaria, Agaricales, Agaricomycetidae, Basidiomycota, Fungi

Not on your lists

5615..6172
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Deinococcus aquatilis RepID=UPI0003731582
Unplaced genomic scaffold K443scaffold_39, whole genome shotgun sequence {ECO:0000313|EMBL:KIK03977.1}; TaxID=1095629 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Tricholomataceae; Laccaria.;" source="Laccaria amethystina LaAM-08-1.;"
Hypothetical Protein
H3-16-all-fractions_k255_5317917_7
unknown

Not on your lists

comp(6263..6850)
DNA (588bp) protein (196aa)

This feature has no annotations

H3-16-all-fractions_k255_5317917_8
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6933..8633)
DNA (1701bp) protein (567aa)
MutT/NUDIX family protein id=5026831 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
MutT/NUDIX family protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
H3-16-all-fractions_k255_5317917_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8780..9688)
DNA (909bp) protein (303aa)
Transglycosylase n=1 Tax=Bacillus amyloliquefaciens Y2 RepID=I2C3R3_BACAM
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:CDM66843.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
nlpD; SPbeta phage protein
H3-16-all-fractions_k255_5317917_10
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9977..11038
DNA (1062bp) protein (354aa)
Oxidoreductase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MH59_CORCM
Uncharacterized protein {ECO:0000313|EMBL:AKF84833.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
oxidoreductase
H3-16-all-fractions_k255_5317917_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11062..11691
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG0_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39758.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-16-all-fractions_k255_5317917_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11742..12290
DNA (549bp) protein (183aa)
FOG: WD40-like repeat {ECO:0000313|EMBL:CDM66933.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Displaying 12 items

View Taxonomy