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H3-16-all-fractions_k255_6015865

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_6015865_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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151..1161
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CEB7B
Outer membrane protein/peptidoglycan-associated (Lipo)protein {ECO:0000313|EMBL:CDM66812.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
OmpA/MotB family outer membrane protein
H3-16-all-fractions_k255_6015865_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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1234..1830
DNA (597bp) protein (199aa)
Decaheme c-type cytochrome, DmsE family n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UYE9_TERSS
decaheme c-type cytochrome
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
H3-16-all-fractions_k255_6015865_3
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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1817..2107
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQX4_9PLAN
Site-specific tyrosine recombinase {ECO:0000313|EMBL:GAN32147.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
recombinase XerD
H3-16-all-fractions_k255_6015865_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2329..2826)
DNA (498bp) protein (166aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
tRNA-adenosine deaminase (EC:3.5.4.-)
tRNA-adenosine deaminase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH22_CHLTF
H3-16-all-fractions_k255_6015865_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3056..4102
DNA (1047bp) protein (349aa)
Integral membrane protein-like n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWH4_HERA2
Predicted membrane protein {ECO:0000313|EMBL:CDM66776.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-16-all-fractions_k255_6015865_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4263..5759
DNA (1497bp) protein (499aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W02_SOLUE
H3-16-all-fractions_k255_6015865_7
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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5797..6597
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B49B41
Uncharacterized protein {ECO:0000313|EMBL:EIP98063.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
H3-16-all-fractions_k255_6015865_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6575..7201
DNA (627bp) protein (209aa)
30S ribosomal protein S19 n=2 Tax=Geobacter sulfurreducens RepID=RS19_GEOSL
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rpsS; 30S ribosomal protein S19
H3-16-all-fractions_k255_6015865_9

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comp(7327..8715)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=uncultured soil bacterium RepID=L0MPL7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGB85075.1}; TaxID=164851 species="Bacteria; environmental samples.;" source="uncultured soil bacterium.;"
hypothetical protein
H3-16-all-fractions_k255_6015865_10
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8920..9669)
DNA (750bp) protein (250aa)
M23 peptidase domain protein n=1 Tax=Xanthomonas campestris pv. raphani 756C RepID=G0CDX9_XANCA
Strain LMCP11 contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ30020.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
M23 peptidase domain-containing protein
H3-16-all-fractions_k255_6015865_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9893..10210
DNA (318bp) protein (106aa)
Uncharacterized protein id=1831510 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
H3-16-all-fractions_k255_6015865_12
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10359..11135
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002DE4328
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACK73004.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
H3-16-all-fractions_k255_6015865_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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11142..11957
DNA (816bp) protein (272aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Urocanate hydratase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISU9_KORVE
urocanate hydratase
Displaying 13 items

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