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H3-16-all-fractions_k255_8289087

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_8289087_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(1..693)
DNA (693bp) protein (231aa)
ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZL3_SOLUE
ATP-dependent carboxylate-amine ligase domain-containing protein
ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp {ECO:0000313|EMBL:ABJ84902.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
H3-16-all-fractions_k255_8289087_2
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(904..3069)
DNA (2166bp) protein (722aa)
prolyl endopeptidase n=1 Tax=Rudanella lutea RepID=UPI00036CAC74
Prolyl endopeptidase {ECO:0000313|EMBL:KER09700.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
prolyl oligopeptidase
H3-16-all-fractions_k255_8289087_3
candidate division Zixibacteria, Bacteria

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comp(3117..3767)
DNA (651bp) protein (217aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
DNA-(apurinic or apyrimidinic site) lyase/endonuclease III (EC:3.2.2.- 4.2.99.18)
Endonuclease III id=1250370 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
H3-16-all-fractions_k255_8289087_4
unknown

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comp(3855..4979)
DNA (1125bp) protein (375aa)

This feature has no annotations

H3-16-all-fractions_k255_8289087_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(5181..6329)
DNA (1149bp) protein (383aa)
Hydrolase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2W3_MYXSD
Predicted membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:CDM65558.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hydrolase
H3-16-all-fractions_k255_8289087_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6421..7293)
DNA (873bp) protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM65557.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H3-16-all-fractions_k255_8289087_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7532..8203
DNA (672bp) protein (224aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDH0_CHLTF
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CDM65555.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sigma-70 family RNA polymerase sigma factor
H3-16-all-fractions_k255_8289087_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8676..9485
DNA (810bp) protein (270aa)
Putative transmembrane anti-sigma factor n=2 Tax=Alicycliphilus denitrificans RepID=E8U0J8_ALIDB
Putative zinc-finger {ECO:0000313|EMBL:CDM65554.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transmembrane anti-sigma factor
H3-16-all-fractions_k255_8289087_9
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(9576..10859)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YYV0_METPS
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
H3-16-all-fractions_k255_8289087_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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11051..12184
DNA (1134bp) protein (378aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
gcvT; glycine cleavage system T-protein (aminomethyltransferase) (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA8_9BACT
H3-16-all-fractions_k255_8289087_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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12310..12699
DNA (390bp) protein (130aa)
Glycine cleavage system H protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFI9_CHLTF
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycine cleavage system H protein
H3-16-all-fractions_k255_8289087_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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12709..13176
DNA (468bp) protein (156aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
glycine dehydrogenase subunit alpha (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFI8_CHLTF
Displaying 12 items

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