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H3-16-all-fractions_k255_8398488

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_8398488_1
unknown

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comp(1..129)
DNA (129bp) protein (43aa)

This feature has no annotations

H3-16-all-fractions_k255_8398488_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(143..358)
DNA (216bp) protein (72aa)
50S ribosomal protein L29 n=1 Tax=Dialister sp. CAG:486 RepID=R6AKN7_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
50S ribosomal protein L29
H3-16-all-fractions_k255_8398488_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(362..790)
DNA (429bp) protein (143aa)
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
50S ribosomal protein L16 id=1900123 bin=GWD2_Nitrospirae-related_57_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
50S ribosomal protein L16
H3-16-all-fractions_k255_8398488_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(821..1654)
DNA (834bp) protein (278aa)
30S ribosomal protein S3 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS3_SOLUE
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
30S ribosomal protein S3
H3-16-all-fractions_k255_8398488_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(1672..2238)
DNA (567bp) protein (189aa)
50S ribosomal protein L22 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQ72_GRAMM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
50S ribosomal protein L22
H3-16-all-fractions_k255_8398488_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(2269..2565)
DNA (297bp) protein (99aa)
30S ribosomal protein S19 n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YGL5_9RHOO
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
30S ribosomal protein S19
H3-16-all-fractions_k255_8398488_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(2655..3485)
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=RL2_ACIC5
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rplB; 50S ribosomal protein L2
H3-16-all-fractions_k255_8398488_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(3573..3878)
DNA (306bp) protein (102aa)
50S ribosomal protein L23 n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHH6_CHLTF
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
50S ribosomal protein L23
H3-16-all-fractions_k255_8398488_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(3882..4577)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DEA79
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribosomal protein L4/L1e
H3-16-all-fractions_k255_8398488_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(4670..5317)
DNA (648bp) protein (216aa)
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
50S ribosomal protein L3 id=8267082 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
50S ribosomal protein L3
H3-16-all-fractions_k255_8398488_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(5408..5728)
DNA (321bp) protein (107aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=12555580 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsJ; 30S ribosomal protein S10
H3-16-all-fractions_k255_8398488_12
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(5813..6130)
DNA (318bp) protein (106aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHU1_CHLTF
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Displaying 12 items

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