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H3-16-all-fractions_k255_918885_15

Organism: H3-16-all-fractions_metab_conc_38

near complete RP 39 / 55 MC: 3 BSCG 42 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 14824..16428

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG25_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 544.0
  • Bit_score: 435
  • Evalue 6.30e-119
RNA polymerase, sigma 54 subunit, RpoN/SigL {ECO:0000313|EMBL:CDM66191.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.3
  • Coverage: 538.0
  • Bit_score: 723
  • Evalue 2.10e-205
RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 544.0
  • Bit_score: 435
  • Evalue 1.80e-119

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
ATGTCGGTCAAGCTCACCACCAACCTTTCGCAGCGACTCGTCCTGACGCCACAGTTGCGCCAGCGCATCGAGATGCTGCAAATGACTTCGCTGGAACTGACCGATCTCATCCAGCAGCAGCTTTTAGAGAATCCCATCCTCGAAGAGGTGCAGTCGCAGGATGAGAAGCGCGAGCTGGAGAAGGAGATTCTCGACCAGCTCGCAGGCTCGCTCGACGACGCGCCCGCGGTCGAAGCCGTCGCGCCCGACGCGCTCAACGGCAGCGCGGCCGGCAACGGCGCGGGTGACGCGCCCGCGGTCGCCGAGGGCTTCGACGCGCCCGAGACGTTCGAGTCGGCCGCGCCCGCCGACGAGTTCGGCGACGTGGCCGAGCCGGGCGAATCGACCGGCGACGCCTTCGAGGAGATAGATTTCGGCCGCGAGTTCCAAGACTATCTCGACCCCGGCTACAAGACGCAGGAGTACGAATATAAGGAGGACGCGCCGACCTTCGAGCAGTTTTTGACGCGCGCGCCTTCGCTCGCCGAGCACCTTGAGTGGCAGCTCCACATGACGCAGGTGCCCGACGACCTCGTCGCCGTCTGCGAATGCGTCATCGGCAACCTCAACAGCGACGGCCGCCTCAACGCGACCAACGAAGAGGTGGCAGAGCTTTCGGGCTGTAACGTCGAGCGTGTCGAGGAGGCTCGACAACTCGTCCTCACGCTCGACCCCATCGGTTGCGGCGCACGCGATGCGCGCGAGTGCCTGCTCGTCCAGCTCAAGGTATTGGGCGACGACGCCTGCCCGCGCGGCGCCGAGCGCTGTCTGGCCGCGCGGCTCATCGGCGAGCATCCACTGTCGGAGCTGCAACAGCACAAGCTGCCGAACCTCGCTAAGCAGATGGGCGTCGAGGTCATGGATTTGGTCGAGGAGCTACAGCACATACGCAAGCTCGACCCCTACCCGGGGCGTCGCTACTCTTCGGAAGAGCCCATCCTCATCGCGCCCGAGGTCTTCATCGAGAAGGTTGACGACGTATACGAAATCTACTTCGCCGACGACGGCGGCCCGCGCCTGCGTATCAGCCGCGACATGCAGCACATGCTCAGCCGCGACGGGACGACGAAGGAGACGAAGGACTTCATCCGCGAAAAGATGCGCTCGGCCGTAGACCTTCTGCGCAACATCGAGCACCGGCGCCAGACCATCTATCGCGTCGTCGAGTGCATCGTCCGCCGACAGGAGCAGTTCCTCAACCACGGCGTCCAGTACATCAAGCCGATGATGCTCAAGGACGTGGCCGAGGATACGGGGATGCATCTTTCGACCATCTCGCGCGTCGTCAACCGCAAGTACGCGCACACGCCGCAGGGCGTCATCGAGCTGCGCCGCTTCTTCACCGAGGGCATGTTGAATGAAGAGGGCGAGGAGGTCTCGACCCGCATCATCAAGCTCCGCATCAAGAAGCTGATTGAAGAAGAGGACTCGCACAACCCGATCACCGACGATCAGGTGGTCAAGATTCTCGCCAAGGAGGGCATCAAGCTGTCGCGCCGCACCGTTGCGAAGTACCGCGACCAGATGTCTATTCCGGGCTCGCGCGAGCGCAAAGCGGTCGTGTGA
PROTEIN sequence
Length: 535
MSVKLTTNLSQRLVLTPQLRQRIEMLQMTSLELTDLIQQQLLENPILEEVQSQDEKRELEKEILDQLAGSLDDAPAVEAVAPDALNGSAAGNGAGDAPAVAEGFDAPETFESAAPADEFGDVAEPGESTGDAFEEIDFGREFQDYLDPGYKTQEYEYKEDAPTFEQFLTRAPSLAEHLEWQLHMTQVPDDLVAVCECVIGNLNSDGRLNATNEEVAELSGCNVERVEEARQLVLTLDPIGCGARDARECLLVQLKVLGDDACPRGAERCLAARLIGEHPLSELQQHKLPNLAKQMGVEVMDLVEELQHIRKLDPYPGRRYSSEEPILIAPEVFIEKVDDVYEIYFADDGGPRLRISRDMQHMLSRDGTTKETKDFIREKMRSAVDLLRNIEHRRQTIYRVVECIVRRQEQFLNHGVQYIKPMMLKDVAEDTGMHLSTISRVVNRKYAHTPQGVIELRRFFTEGMLNEEGEEVSTRIIKLRIKKLIEEEDSHNPITDDQVVKILAKEGIKLSRRTVAKYRDQMSIPGSRERKAVV*