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H3-16-all-fractions_k255_918885

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_918885_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..354
DNA (354bp) protein (118aa)
HD-GYP domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH64_CHLTF
HD-GYP domain-containing protein {ECO:0000313|EMBL:CDM66180.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
HD-GYP domain-containing protein
H3-16-all-fractions_k255_918885_2
unknown

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397..1182
DNA (786bp) protein (262aa)

This feature has no annotations

H3-16-all-fractions_k255_918885_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1332..2678
DNA (1347bp) protein (449aa)
Signal recognition particle receptor FtsY n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFX6_CHLTF
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
signal recognition particle-docking protein FtsY
H3-16-all-fractions_k255_918885_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2736..3812
DNA (1077bp) protein (359aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILB2_KORVE
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
5-amino-6-(5-phosphoribosylamino)uracil reductase
H3-16-all-fractions_k255_918885_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3906..4730
DNA (825bp) protein (275aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BQH3_9GAMM
dimethyladenosine transferase
H3-16-all-fractions_k255_918885_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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4860..6509
DNA (1650bp) protein (550aa)
Putative hydrolase of the metallo-beta-lactamase superfamily n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LI27_CHLTF
Predicted hydrolase of the metallo-beta-lactamase superfamily {ECO:0000313|EMBL:CDM66185.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative metallo-beta-lactamase superfamily hydrolase
H3-16-all-fractions_k255_918885_7
unknown

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6557..6889
DNA (333bp) protein (111aa)

This feature has no annotations

H3-16-all-fractions_k255_918885_8
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6902..7345
DNA (444bp) protein (148aa)
Amino acid-binding ACT domain protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKP2_9FIRM
amino acid-binding ACT domain-containing protein
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:EEG76064.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
H3-16-all-fractions_k255_918885_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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7353..8126
DNA (774bp) protein (258aa)
3-oxoacyl-acyl-carrier protein reductase n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2ESA3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDM66186.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ydfG3; short-chain dehydrogenase/reductase
H3-16-all-fractions_k255_918885_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8145..9032
DNA (888bp) protein (296aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000256|SAAS:SAAS00094257};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
undecaprenyl-diphosphatase UppP (EC:3.6.1.27)
Undecaprenyl-diphosphatase id=4719327 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
H3-16-all-fractions_k255_918885_11
unknown

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9126..9446
DNA (321bp) protein (107aa)

This feature has no annotations

H3-16-all-fractions_k255_918885_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9443..11188
DNA (1746bp) protein (582aa)
Exonuclease RecJ {ECO:0000313|EMBL:CDM66188.1}; EC=3.1.-.- {ECO:0000313|EMBL:CDM66188.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
recJ; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3K9_ACIC5
H3-16-all-fractions_k255_918885_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11265..13703
DNA (2439bp) protein (813aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS1_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66189.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H3-16-all-fractions_k255_918885_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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13783..14586
DNA (804bp) protein (268aa)
ABC-type (Unclassified) transport system, ATPase component {ECO:0000313|EMBL:CDM66190.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDM66190.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ABC transporter ATPase (EC:3.6.3.-)
ABC transporter ATP-binding protein n=2 Tax=Labrenzia RepID=U7FRM7_9RHOB
H3-16-all-fractions_k255_918885_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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14824..16428
DNA (1605bp) protein (535aa)
RNA polymerase sigma-54 factor n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG25_CHLTF
RNA polymerase, sigma 54 subunit, RpoN/SigL {ECO:0000313|EMBL:CDM66191.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RNA polymerase sigma-54 factor
H3-16-all-fractions_k255_918885_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16539..17090
DNA (552bp) protein (184aa)
Ribosomal subunit interface protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLF6_CHLTF
Ribosomal subunit interface protein {ECO:0000313|EMBL:CDM66192.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ribosomal subunit interface protein
H3-16-all-fractions_k255_918885_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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17255..18250
DNA (996bp) protein (332aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
HPr kinase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] id=12554065 bin=CNBR_ACIDO species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HPr kinase/phosphorylase
H3-16-all-fractions_k255_918885_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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18243..19187
DNA (945bp) protein (315aa)
Nucleotide-binding protein PYK22_02206 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UPF0042 nucleotide-binding protein DAMO_1192 id=4810653 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
H3-16-all-fractions_k255_918885_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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19203..19649
DNA (447bp) protein (149aa)
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:CDM66195.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDM66195.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PTS system transporter subunit IIA (EC:2.7.1.69)
PTS system IIA component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGJ3_CHLTF
H3-16-all-fractions_k255_918885_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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19683..19961
DNA (279bp) protein (93aa)
Phosphotransferase system, phosphocarrier protein Hpr n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CUZ4_9ALTE
Phosphotransferase system HPr (HPr) family protein {ECO:0000313|EMBL:CDM66196.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphotransferase system HPr family protein
H3-16-all-fractions_k255_918885_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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20000..21766
DNA (1767bp) protein (589aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Phosphoenolpyruvate-protein phosphotransferase id=4815898 bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
phosphoenolpyruvate-protein phosphotransferase
Displaying 21 items

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