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H3-16-all-fractions_k255_5615582

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_5615582_1
unknown

Not on your lists

comp(1..291)
DNA (291bp) protein (97aa)

This feature has no annotations

H3-16-all-fractions_k255_5615582_2
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(304..1128)
DNA (825bp) protein (275aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCU80949.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CCU80949.1};; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
UDP-glucose 4-epimerase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E341_9FIRM
NAD-dependent epimerase/dehydratase
H3-16-all-fractions_k255_5615582_3
RIFOXYA1_FULL_Bacteriovorax_36_14_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(1205..1687)
DNA (483bp) protein (161aa)
Putative DnaK suppressor protein homologue n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1WZ51_BACMS
putative DnaK suppressor protein
Tax=RIFOXYA1_FULL_Bacteriovorax_36_14_curated
H3-16-all-fractions_k255_5615582_4
RIFOXYA1_FULL_Bacteriovorax_36_14_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

2011..2652
DNA (642bp) protein (214aa)
Tax=RIFOXYA1_FULL_Bacteriovorax_36_14_curated
H3-16-all-fractions_k255_5615582_5
unknown

Not on your lists

comp(2653..3441)
DNA (789bp) protein (263aa)

This feature has no annotations

H3-16-all-fractions_k255_5615582_6
RIFOXYA1_FULL_Bacteriovorax_36_14_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(3438..3872)
DNA (435bp) protein (145aa)
Flagellar motor switch protein FliG id=4715622 bin=GWA2__Bacteriovorax-rel_49_15 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
flagellar motor switch protein FliG
Tax=RIFOXYA1_FULL_Bacteriovorax_36_14_curated
H3-16-all-fractions_k255_5615582_7
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3869..4858)
DNA (990bp) protein (330aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|SAAS:SAAS00055236};; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
ADP-L-Glycero-D-mannoheptose-6-epimerase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X466_BACMS
rfaD; ADP-L-Glycero-D-mannoheptose-6-epimerase
H3-16-all-fractions_k255_5615582_8
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4979..5839
DNA (861bp) protein (287aa)
Spermidine synthase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1WX48_BACMS
speE; spermidine synthase
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
H3-16-all-fractions_k255_5615582_9
Idiomarina loihiensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5841..6737
DNA (897bp) protein (299aa)
Agmatinase n=2 Tax=Idiomarina loihiensis RepID=Q5QTW3_IDILO
speB; agmatinase
Agmatinase {ECO:0000313|EMBL:AAV82052.1}; TaxID=283942 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR).;"
H3-16-all-fractions_k255_5615582_10
unknown

Not on your lists

6887..7240
DNA (354bp) protein (118aa)

This feature has no annotations

H3-16-all-fractions_k255_5615582_11
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7219..7965)
DNA (747bp) protein (249aa)
Sec-independent protein translocase protein TatC n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0RJW2_9DELT
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
tatC; Sec-independent protein translocase protein TatC
H3-16-all-fractions_k255_5615582_12
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8021..8638
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0SZF6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EQC50443.1}; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
H3-16-all-fractions_k255_5615582_13
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8569..9354)
DNA (786bp) protein (262aa)
Nitrogen fixation protein NifU n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DIT8_DESVM
Fe-S cluster assembly protein NifU
Nitrogen fixation protein NifU {ECO:0000256|PIRNR:PIRNR000375}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
H3-16-all-fractions_k255_5615582_14
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9341..10144)
DNA (804bp) protein (268aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974, ECO:0000313|EMBL:CBW27045.1}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
Methionine aminopeptidase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X473_BACMS
map; methionine aminopeptidase
H3-16-all-fractions_k255_5615582_15
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10176..11138
DNA (963bp) protein (321aa)
Putative dehydrogenase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X475_BACMS
putative dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:CBW27047.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
H3-16-all-fractions_k255_5615582_16
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11135..12211
DNA (1077bp) protein (359aa)
Putative agmatinase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X476_BACMS
putative agmatinase
Putative agmatinase {ECO:0000313|EMBL:CBW27048.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
H3-16-all-fractions_k255_5615582_17
RIFOXYA1_FULL_Bacteriovorax_36_14_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

12208..12873
DNA (666bp) protein (222aa)
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X477_BACMS
putative leucyl/phenylalanyl-tRNA--protein transferase
Tax=RIFOXYA1_FULL_Bacteriovorax_36_14_curated
H3-16-all-fractions_k255_5615582_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12876..13952)
DNA (1077bp) protein (359aa)
Putative fatty acid desaturase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P8_GEMAT
putative fatty acid desaturase
Putative fatty acid desaturase {ECO:0000313|EMBL:BAH37208.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
H3-16-all-fractions_k255_5615582_19
unknown

Not on your lists

comp(13970..14347)
DNA (378bp) protein (126aa)

This feature has no annotations

H3-16-all-fractions_k255_5615582_20
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14357..15994)
DNA (1638bp) protein (546aa)
Putative NADH dehydrogenase I chain C/D n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X480_BACMS
putative NADH dehydrogenase I chain C/D
Putative NADH dehydrogenase I chain C/D {ECO:0000313|EMBL:CBW27052.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
H3-16-all-fractions_k255_5615582_21
unknown

Not on your lists

comp(15987..16370)
DNA (384bp) protein (128aa)

This feature has no annotations

H3-16-all-fractions_k255_5615582_22
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(16370..17836)
DNA (1467bp) protein (489aa)
Putative lipoprotein id=4715663 bin=GWA2__Bacteriovorax-rel_49_15 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
putative lipoprotein
Tax=GWA2_Bdellovibrionales_49_15_curated
H3-16-all-fractions_k255_5615582_23
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18198..19820
DNA (1623bp) protein (541aa)
Putative glycoprotein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1WY72_BACMS
putative glycoprotein
Putative glycoprotein {ECO:0000313|EMBL:CBW27627.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
H3-16-all-fractions_k255_5615582_24
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

19875..20921
DNA (1047bp) protein (349aa)
PE-PGRS family protein id=4964123 bin=GWA2__Bacteriovorax-rel_49_15 species=Mycobacterium tuberculosis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
sphB2; autotransporter
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
H3-16-all-fractions_k255_5615582_25
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20887..23778)
DNA (2892bp) protein (964aa)
Putative membrane protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1WY70_BACMS
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBW27625.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
Displaying 25 items

View Taxonomy