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H3-16-all-fractions_k255_6580521

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_6580521_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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comp(3..1094)
DNA (1092bp) protein (364aa)
Serine/threonine protein kinases id=4655207 bin=GWF2_Bacteroidetes_35_48 species=uncultured Cytophagia bacterium genus=unknown taxon_order=unknown taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Tetratricopeptide TPR_1 repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
H3-16-all-fractions_k255_6580521_2
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1227..3173
DNA (1947bp) protein (649aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Threonine--tRNA ligase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KW73_SOLCM
threonyl-tRNA synthetase
H3-16-all-fractions_k255_6580521_3
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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3471..3926
DNA (456bp) protein (152aa)
Translation initiation factor IF-3 id=2061981 bin=GWE2_Bacteroidetes_40_63 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
translation initiation factor 3
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
H3-16-all-fractions_k255_6580521_4
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(3995..4774)
DNA (780bp) protein (260aa)
Diaminopimelate epimerase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZUT8_9BACT
diaminopimelate epimerase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
H3-16-all-fractions_k255_6580521_5
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(4774..4995)
DNA (222bp) protein (74aa)
id=2035092 bin=GWE2_Bacteroidetes_29_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
H3-16-all-fractions_k255_6580521_6
unknown

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comp(5152..5451)
DNA (300bp) protein (100aa)

This feature has no annotations

H3-16-all-fractions_k255_6580521_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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5626..7134
DNA (1509bp) protein (503aa)
protease do id=4607772 bin=GWF2_Bacteroidetes_29_10 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
periplasmic serine protease, Do/DeqQ family
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
H3-16-all-fractions_k255_6580521_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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7312..8175
DNA (864bp) protein (288aa)
RNA polymerase sigma factor rpoD id=3893684 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
RNA polymerase sigma factor rpoD
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
H3-16-all-fractions_k255_6580521_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

8275..8628
DNA (354bp) protein (118aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBQ0_FLUTR
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Displaying 9 items

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