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H3-16-all-fractions_k255_4990247

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_4990247_1
unknown

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2..244
DNA (243bp) protein (81aa)

This feature has no annotations

H3-16-all-fractions_k255_4990247_2
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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257..706
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003809B79
Uncharacterized protein {ECO:0000313|EMBL:GAL85235.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
H3-16-all-fractions_k255_4990247_3
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

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790..1908
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034D1DD5
outer membrane protein/protective antigen OMA87
Tax=RBG_13_Aminicenantes_62_12_curated
H3-16-all-fractions_k255_4990247_4

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1895..3040
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034D1DD5
Uncharacterized protein {ECO:0000313|EMBL:KKN33571.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
surface antigen (D15)
H3-16-all-fractions_k255_4990247_5
unknown

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comp(3047..3478)
DNA (432bp) protein (144aa)

This feature has no annotations

H3-16-all-fractions_k255_4990247_6
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3646..4110
DNA (465bp) protein (155aa)
Protein MraZ n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LQ94_9BACT
protein MraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
H3-16-all-fractions_k255_4990247_7
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4107..5009
DNA (903bp) protein (301aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
16S rRNA methyltransferase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003798034
S-adenosyl-methyltransferase MraW
H3-16-all-fractions_k255_4990247_8
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5018..5389
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000347E402
Uncharacterized protein {ECO:0000313|EMBL:GAL86984.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
H3-16-all-fractions_k255_4990247_9
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5379..7472
DNA (2094bp) protein (698aa)
Cell division protein, penicillin-binding protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11RG8_CYTH3
Cell division protein, penicillin-binding protein {ECO:0000313|EMBL:GAL86985.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
ftsI; cell division protein, penicillin-binding protein
H3-16-all-fractions_k255_4990247_10
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7472..8935
DNA (1464bp) protein (488aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.13)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000347CB21
H3-16-all-fractions_k255_4990247_11
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8932..9327
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003813856
Uncharacterized protein {ECO:0000313|EMBL:GAL86987.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
H3-16-all-fractions_k255_4990247_12
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9350..10564
DNA (1215bp) protein (405aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=MRAY_CYTH3
H3-16-all-fractions_k255_4990247_13
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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10608..10904
DNA (297bp) protein (99aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Joostella marina DSM 19592 RepID=I3C5Y6_9FLAO
Displaying 13 items

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