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H3-16-all-fractions_k255_6184304

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_6184304_1
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(56..994)
DNA (939bp) protein (313aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
Riboflavin kinase / FMN adenylyltransferase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JIG7_9BACT
riboflavin kinase/FMN adenylyltransferase
H3-16-all-fractions_k255_6184304_2
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(991..1671)
DNA (681bp) protein (227aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
tRNA pseudouridine synthase B (EC:4.2.1.70)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003798A45
H3-16-all-fractions_k255_6184304_3
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1671..2459)
DNA (789bp) protein (263aa)
Undecaprenyl-diphosphatase id=4921600 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
UDP-diphosphatase
Tax=GWA2_Bacteroidetes_32_17_curated
H3-16-all-fractions_k255_6184304_4
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2456..2665)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TSG0_MARTH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR20780.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB; 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter; tractuosus).;"
H3-16-all-fractions_k255_6184304_5
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2673..3554)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI00036EF5C8
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
cell division protein
H3-16-all-fractions_k255_6184304_6
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3684..4628)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000361CC4C
Uncharacterized protein {ECO:0000313|EMBL:GAL85079.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
H3-16-all-fractions_k255_6184304_7
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4631..5170)
DNA (540bp) protein (180aa)
RNA polymerase, sigma-E factor; heat shock and oxidative stress n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11WI6_CYTH3
rpoE; heat shock and oxidative stress RNA polymerase sigma-E factor
RNA polymerase, sigma-E factor heat shock and oxidative stress {ECO:0000313|EMBL:ABG58230.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
H3-16-all-fractions_k255_6184304_8
unknown

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5492..6016
DNA (525bp) protein (175aa)

This feature has no annotations

H3-16-all-fractions_k255_6184304_9
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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6138..6578
DNA (441bp) protein (147aa)
PF09917 family protein id=4701974 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
SIGNAL peptide protein
Tax=RBG_13_Nitrospirae_41_22_curated
H3-16-all-fractions_k255_6184304_10
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6600..7061)
DNA (462bp) protein (154aa)
Transcriptional regulator n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11WI5_CYTH3
Transcriptional regulator {ECO:0000313|EMBL:GAL85076.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
slyA; transcriptional regulator
H3-16-all-fractions_k255_6184304_11
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7123..7812)
DNA (690bp) protein (230aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
folE; GTP cyclohydrolase (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NQB3_9BACT
H3-16-all-fractions_k255_6184304_12
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7772..8182)
DNA (411bp) protein (137aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WJ41_9BACT
6-pyruvoyl-tetrahydropterin synthase
H3-16-all-fractions_k255_6184304_13
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8298..9122
DNA (825bp) protein (275aa)
bglX; b-glucosidase (EC:3.2.1.21)
B-glucosidase, glycoside hydrolase family 3 protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11P53_CYTH3
B-glucosidase {ECO:0000313|EMBL:GAL84681.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Displaying 13 items

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