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H3-16-all-fractions_k255_6418309

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_6418309_1
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3..1682
DNA (1680bp) protein (560aa)
excinuclease ABC subunit B n=1 Tax=Flexithrix dorotheae RepID=UPI0003825533
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
excinuclease ABC, b subunit
H3-16-all-fractions_k255_6418309_2
unknown

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1853..2584
DNA (732bp) protein (244aa)

This feature has no annotations

H3-16-all-fractions_k255_6418309_3
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2769..3623
DNA (855bp) protein (285aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS07162.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Putative uncharacterized protein id=4245212 bin=GWF2_Bacteroidetes_38_335 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
H3-16-all-fractions_k255_6418309_4
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3811..4416)
DNA (606bp) protein (202aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Superoxide dismutase n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7V924_9BACT
manganese/iron superoxide dismutase
H3-16-all-fractions_k255_6418309_5
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4504..4953)
DNA (450bp) protein (150aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
tRNA-specific adenosine deaminase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LLZ9_9BACT
CMP deaminase
H3-16-all-fractions_k255_6418309_6
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4956..5597)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11YW3_CYTH3
Uncharacterized protein {ECO:0000313|EMBL:GAL84661.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
H3-16-all-fractions_k255_6418309_7
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5904..7670
DNA (1767bp) protein (589aa)
Aspartate--tRNA ligase n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7YBB1_9BACT
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:GAL84662.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
aspartyl-tRNA synthetase
H3-16-all-fractions_k255_6418309_8
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7704..9317
DNA (1614bp) protein (538aa)
gapN; gyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC:1.2.1.9)
aldehyde dehydrogenase n=1 Tax=Cytophaga aurantiaca RepID=UPI0003690D40
Aldehyde dehydrogenase {ECO:0000313|EMBL:GAL86774.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
H3-16-all-fractions_k255_6418309_9
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9329..10852
DNA (1524bp) protein (508aa)
Amino acid permease-associated region id=3187806 bin=GWC2_Ignavibacteria_38_9 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
amino acid permease
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
H3-16-all-fractions_k255_6418309_10
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10932..12383
DNA (1452bp) protein (484aa)
Potassium/proton antiporter, CPA1 family n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11U06_CYTH3
cvrA; Na(+)/H(+) exchanger
Potassium/proton antiporter, CPA1 family {ECO:0000313|EMBL:ABG59108.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
H3-16-all-fractions_k255_6418309_11
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(12563..13339)
DNA (777bp) protein (259aa)
preprotein translocase subunit SecD n=1 Tax=Pontibacter roseus RepID=UPI0003751C8E
preprotein translocase subunit SecD
Preprotein translocase subunit SecD {ECO:0000313|EMBL:AKD03233.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
Displaying 11 items

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