ggKbase home page

H3-16-all-fractions_k255_7190555

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_7190555_1
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(174..2153)
DNA (1980bp) protein (660aa)
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JTV3_9BACT
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit {ECO:0000313|EMBL:ELR72215.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
dehydrogenase
H3-16-all-fractions_k255_7190555_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2365..3603
DNA (1239bp) protein (413aa)
peptidase M16 n=1 Tax=Cytophaga aurantiaca RepID=UPI00037353BF
Peptidase M16 domain protein {ECO:0000313|EMBL:CCH51105.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
pqqL; zinc protease
H3-16-all-fractions_k255_7190555_3
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3605..4096
DNA (492bp) protein (164aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Pontibacter roseus RepID=UPI000375FC1E
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
H3-16-all-fractions_k255_7190555_4
unknown

Not on your lists

comp(4082..4333)
DNA (252bp) protein (84aa)

This feature has no annotations

H3-16-all-fractions_k255_7190555_5
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4438..4794
DNA (357bp) protein (119aa)
Putative uncharacterized protein id=1801694 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_32_17_curated
H3-16-all-fractions_k255_7190555_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4795..5991)
DNA (1197bp) protein (399aa)
Aqualysin 1 {ECO:0000313|EMBL:AEW02450.1}; EC=3.4.21.111 {ECO:0000313|EMBL:AEW02450.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aqualysin 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB67_NIAKG
aqualysin 1
H3-16-all-fractions_k255_7190555_7
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6202..7476)
DNA (1275bp) protein (425aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
cysN; sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11XE4_CYTH3
H3-16-all-fractions_k255_7190555_8
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7572..8513)
DNA (942bp) protein (314aa)
cysD; sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
Sulfate adenylyltransferase subunit 2 n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11XE3_CYTH3
H3-16-all-fractions_k255_7190555_9
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8510..9103)
DNA (594bp) protein (198aa)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
cysC; adenylylsulfate kinase (EC:2.7.1.25)
adenylylsulfate kinase n=1 Tax=Cytophaga aurantiaca RepID=UPI0003775FB3
H3-16-all-fractions_k255_7190555_10
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9251..10024
DNA (774bp) protein (258aa)
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7)
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JTW6_9BACT
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:ELR70984.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
H3-16-all-fractions_k255_7190555_11
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10059..11855
DNA (1797bp) protein (599aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3II89_9PLAN
histidine kinase
H3-16-all-fractions_k255_7190555_12
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11934..12860
DNA (927bp) protein (309aa)
Glycosyl transferase {ECO:0000313|EMBL:GAL84021.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Glycosyl transferase, family 2 id=2671261 bin=GWF2_Melainabacteria_37_15 species=Rhodobacteraceae bacterium HTCC2083 genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
glycosyl transferase family protein
H3-16-all-fractions_k255_7190555_13
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12866..13564
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1IGH8_PSEE4
Uncharacterized protein {ECO:0000313|EMBL:GAL84022.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
H3-16-all-fractions_k255_7190555_14
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

13561..14652
DNA (1092bp) protein (364aa)
Putative uncharacterized protein id=2671260 bin=GWF2_Melainabacteria_37_15 species=Rhodobacteraceae bacterium HTCC2083 genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
hypothetical protein
Tax=GWF2_Melainabacteria_37_15_curated
H3-16-all-fractions_k255_7190555_15
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14652..15320
DNA (669bp) protein (223aa)
S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Pontibacter roseus RepID=UPI00037AE8A8
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:AKD02646.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
H3-16-all-fractions_k255_7190555_16
unknown

Not on your lists

comp(15330..16421)
DNA (1092bp) protein (364aa)

This feature has no annotations

H3-16-all-fractions_k255_7190555_17
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16505..16984)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7YBG4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMS34526.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
H3-16-all-fractions_k255_7190555_18
unknown

Not on your lists

17306..18094
DNA (789bp) protein (263aa)

This feature has no annotations

H3-16-all-fractions_k255_7190555_19
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18091..18456)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XDN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AHM60287.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
H3-16-all-fractions_k255_7190555_20
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18542..19510)
DNA (969bp) protein (323aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
delta-aminolevulinic acid dehydratase, partial n=1 Tax=Cytophagales str. B6 RepID=UPI0003B313DA
H3-16-all-fractions_k255_7190555_21
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19585..20568)
DNA (984bp) protein (328aa)
hemL; aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:ABG57934.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABG57934.1};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
Aminotransferase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11XD2_CYTH3
Displaying 21 items

View Taxonomy