ggKbase home page

H3-16-all-fractions_k255_7947883

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_7947883_1
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20..1309)
DNA (1290bp) protein (430aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Cytophaga aurantiaca RepID=UPI000380C79C
H3-16-all-fractions_k255_7947883_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

1390..1782
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZM36_9BACT
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
H3-16-all-fractions_k255_7947883_3
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1775..2551)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034C62F1
Hydrolase {ECO:0000313|EMBL:EAY29614.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
H3-16-all-fractions_k255_7947883_4
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2539..3693)
DNA (1155bp) protein (385aa)
Aminotransferase family protein {ECO:0000313|EMBL:GAL83899.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Aminotransferase class I and II id=4955380 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
aminotransferase
H3-16-all-fractions_k255_7947883_5
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3695..4249)
DNA (555bp) protein (185aa)
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; Short=PDF {ECO:0000255|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000255|HAMAP-Rule:MF_00163};; Polypeptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003457EE2
H3-16-all-fractions_k255_7947883_6
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4303..4716)
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
Holliday junction resolvase n=1 Tax=Cytophaga aurantiaca RepID=UPI000368590D
Holliday junction resolvase YqgF
H3-16-all-fractions_k255_7947883_7
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4739..6007)
DNA (1269bp) protein (423aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL84072.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
hypothetical protein id=24657717 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
H3-16-all-fractions_k255_7947883_8
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6205..7155
DNA (951bp) protein (317aa)
ctpA; C-terminal processing peptidase-3 (EC:3.4.21.-)
peptidase S41 n=1 Tax=Cytophaga aurantiaca RepID=UPI00035D2611
Peptidase S41 {ECO:0000313|EMBL:GAL84071.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Displaying 8 items

View Taxonomy