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H3-16-all-fractions_k255_1865069

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H3-16-all-fractions_k255_1865069_1
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3..548
DNA (546bp) protein (182aa)
hutG; formiminoglutamase-like protein (EC:3.5.3.8)
Formiminoglutamase-related protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11QL1_CYTH3
Formiminoglutamase-like protein {ECO:0000313|EMBL:GAL83675.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
H3-16-all-fractions_k255_1865069_2
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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563..1009
DNA (447bp) protein (149aa)
Transporter {ECO:0000313|EMBL:GAL83676.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
H3-16-all-fractions_k255_1865069_3
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1019..1510)
DNA (492bp) protein (164aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RMX0_9CLOT
methylated-DNA--protein-cysteine methyltransferase
H3-16-all-fractions_k255_1865069_4
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1521..1736)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:GAL86611.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
H3-16-all-fractions_k255_1865069_5
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1838..3157
DNA (1320bp) protein (440aa)
Putative gluconate permease n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ATY2_MARSH
putative gluconate permease
Putative gluconate permease {ECO:0000313|EMBL:EAR00433.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170 / KCCM 42371).;"
H3-16-all-fractions_k255_1865069_6
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3242..4474
DNA (1233bp) protein (411aa)
RNA helicase n=1 Tax=Cytophaga aurantiaca RepID=UPI000363437D
deaD; ATP-dependent RNA helicase protein
ATP-dependent RNA helicase protein {ECO:0000313|EMBL:ABG59086.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
H3-16-all-fractions_k255_1865069_7
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4541..4921)
DNA (381bp) protein (127aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FMQ7_9BACT
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EJF11661.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
ATPase
H3-16-all-fractions_k255_1865069_8
unknown

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comp(4986..5156)
DNA (171bp) protein (57aa)

This feature has no annotations

H3-16-all-fractions_k255_1865069_9
unknown

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comp(5227..5379)
DNA (153bp) protein (51aa)

This feature has no annotations

H3-16-all-fractions_k255_1865069_10
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(5479..7071)
DNA (1593bp) protein (531aa)
gltB; glutamate synthase large subunit (EC:1.4.1.13)
Glutamate synthase, large subunit n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11PG0_CYTH3
Glutamate synthase large subunit {ECO:0000313|EMBL:GAL84550.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
H3-16-all-fractions_k255_1865069_11
unknown

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7208..7555
DNA (348bp) protein (116aa)

This feature has no annotations

H3-16-all-fractions_k255_1865069_12
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7585..8754)
DNA (1170bp) protein (390aa)
Serine-type D-Ala-D-Ala carboxypeptidase id=3794166 bin=GWF2_Bacteroidetes_35_48 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
serine-type D-Ala-D-Ala carboxypeptidase
Tax=GWF2_Bacteroidetes_35_48_curated
H3-16-all-fractions_k255_1865069_13
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8757..9371)
DNA (615bp) protein (205aa)
Putative uncharacterized protein id=3794168 bin=GWF2_Bacteroidetes_35_48 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
H3-16-all-fractions_k255_1865069_14
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9647..10546
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000347CA10
GTP-binding protein Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
H3-16-all-fractions_k255_1865069_15
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10685..11995
DNA (1311bp) protein (437aa)
GTPase Der n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LKX0_9BACT
GTP-binding protein Der
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
H3-16-all-fractions_k255_1865069_16
unknown

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12056..12250
DNA (195bp) protein (65aa)

This feature has no annotations

H3-16-all-fractions_k255_1865069_17
unknown

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12391..12609
DNA (219bp) protein (73aa)
hypothetical protein
H3-16-all-fractions_k255_1865069_18
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12721..13341
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JIJ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAL87211.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
H3-16-all-fractions_k255_1865069_19
Eikenella corrodens, Eikenella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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13427..13963
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Eikenella corrodens CC92I RepID=V7IFE7_EIKCO
Uncharacterized protein {ECO:0000313|EMBL:ETA84064.1}; TaxID=1073362 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Eikenella.;" source="Eikenella corrodens CC92I.;"
uncharacterized protein
H3-16-all-fractions_k255_1865069_20
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13956..14510
DNA (555bp) protein (185aa)
kptA; RNA 2'-phosphotransferase (EC:2.7.-.-)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
Probable RNA 2'-phosphotransferase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11S16_CYTH3
H3-16-all-fractions_k255_1865069_21
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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14579..15559
DNA (981bp) protein (327aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI0003485EC5
pseudouridine synthase
H3-16-all-fractions_k255_1865069_22
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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15568..16323
DNA (756bp) protein (252aa)
HEAT domain containing protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ63_PEDHD
HEAT domain-containing protein
HEAT domain containing protein {ECO:0000313|EMBL:ACU02545.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
H3-16-all-fractions_k255_1865069_23
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(16324..16803)
DNA (480bp) protein (160aa)
thioesterase n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003489107
Thioesterase {ECO:0000313|EMBL:KIA94438.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
hypothetical protein
H3-16-all-fractions_k255_1865069_24
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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16909..17121
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C8Z5_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ77184.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
H3-16-all-fractions_k255_1865069_25
unknown

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17188..17925
DNA (738bp) protein (246aa)

This feature has no annotations

H3-16-all-fractions_k255_1865069_26
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(18070..19197)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000348C077
Uncharacterized protein {ECO:0000313|EMBL:KIA99811.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
acyltransferase 3
H3-16-all-fractions_k255_1865069_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(19503..20408)
DNA (906bp) protein (302aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
3-isopropylmalate dehydrogenase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T702_NIAKG
3-isopropylmalate dehydrogenase
Displaying 27 items

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