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H3-16-all-fractions_k255_3778117_1

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: comp(3..3893)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 1297.0
  • Bit_score: 2342
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 1297.0
  • Bit_score: 2258
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=RPOC_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 1297.0
  • Bit_score: 2258
  • Evalue 0.0

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3891
ATGGCGTTCAGAAAAAATAAAAAATTAAATCAGGACTTTAACAAAGTTACAATCAGTCTTGCTTCCCCTGAGTCGATTCTTGAAAGCTCATACGGAGAAGTTACCCAGCCTGAAACGATCAATTACAGAACTTACAAACCCGAAATGGGTGGTTTGTTCTGCGAAAGAATTTTCGGTCCGGTAAAAGACTGGGAGTGTCACTGCGGAAAATATAAGAGAATCAGGTATAAGGGAATTATCTGTGACAGATGCGGTGTAGAAGTTACCGAGAAGAAGGTAAGAAGAGAAAGAATGGGGCACATTGAGCTGGTTGTTCCGATCGCTCACATCTGGTATTTCAGATCTCTGCCGAATAAAATCGGTTATCTGCTTGGCCTTCCTACAAAGAAACTTGATCAGATCATTTATTATGAAAGATATGTAGTAATTCAACCGGGGATCAAAGCGGAGGACGGAATCAATTACCTTGACTTCCTTACCGAGGATGAATACCTGGATATCCTGGATAAGCTTCCAAGAGAAAACCAGATGCTGGACGATGAAGATCCGAATAAATTTATCGCGAAAATGGGCGCTGAATCTTTGGAGATGCTTCTTTCAAGAATTAAGCTGGATGAACTTTCTTACAGCCTGCGTCACGCTGCTGCCAATGATACTTCTCAGCAAAGAAAGGCTGAGGCTTTAAAGAGACTTAAAGTTGTCGAAGCATTCAGAGAGGCAAGAACAAGAATTGAAAACAAACCAGAATGGATGATCATTAAGATGGTGCCGGTGATTCCTCCGGAACTTCGTCCTCTCGTACCTTTGGATGGCGGTCGTTTTGCAACGTCTGACCTGAACGATTTGTACAGAAGGGTAATCATTCGTAACAACAGGTTGAAGAGACTTATTGAAATCAAGGCTCCTGAAGTAATCCTCAGAAATGAGAAGCGTATGCTTCAGGAAGCTGTCGATTCACTATTCGATAACTCAAGAAAAGTAAATGCAGTAAGAGCAGAAGGAAACAGAGCCCTGAAATCACTCAGCGATATGCTGAAAGGAAAGCAAGGACGTTTCCGTCAAAACCTTCTTGGAAAGAGAGTGGATTACTCAGGCCGTTCTGTGATTGTGGTAGGTCCTGAGCTGAAACTGCATGAGTGCGGTCTTCCGAAAGACATGGCTGCAGAGCTTTTCAAACCATTTATTATCAGAAAGCTGATCGAAAGAGGAATTGTGAAGACGGTAAAATCAGCCAAGAAAATCGTCGATAGAAAAGACCCTGTAGTATGGGATATTCTTGAAAACGTATTGAAAGGACACCCTGTGCTACTGAACCGTGCTCCAACACTGCACAGATTAGGTATTCAGGCCTTCCAGCCAAAGCTGATCGAAGGAAAAGCGATCCAACTTCACCCACTTGTTTGTACTGCGTTCAACGCCGACTTTGACGGTGACCAGATGGCCGTTCACGTTCCGCTGGGACATGAGGCAATTCTGGAAGCTTCTATGCTGATGCTTGCATCACACAATATTCTTAACCCTGCTAACGGCGCGCCAATTACTGTACCTTCTCAGGACATGGTACTTGGATTATACTATGTAACCAAGGGAAGAAAAGGAACGAAGGAAAGCCCTGTACTGGGTGAAGGGAAAATTTTCTACGGATCAGAGGAAGTGGTTATTGCTCTAAACGAGGGAAGACTTTCTCAGCATGCTCATATCAAGGTAAGAACTCAGGTGAAAGATGAAAATGGCAAGCTTAAGACCAAAGTAATCGAAACGGTTGCCGGCCGCGTGCTGTTTAACCTGATGGTTCCTGAGCAAGTAGGTTATGTTAATGAACTTCTGACTAAAAAGAAACTGCAGCAGATCATTTCTCAGGTGCACAAAGCAGCGGGAATGGCAAGAACTGCTCAGTTCCTGGATGATATCAAACAATTAGGATTCCAGTCGGCCTTTAAAGGTGGATTATCAATCGGATTGTCTGACGTAAAAGTACCGGATGATAAGAATGGATTGATCGAAGGGGCGAAGAAAGATGTGGTAGCCGTATGGAACAACTACCTGATGGGTCTTATCACCGACAACGAAAGATATAACCAGGTAATCGATATCTGGACGAGGGTTAACTCTCAGATCACTGAAACACTGATGCGTCAGCTTGAAAGCGATAATCAGGGATTCAACTCGATCTATATGATGATGCACTCAGGTGCGAGAGGATCCAGAGAGCAGATACGTCAGCTGGGTGGTATGAGAGGTCTGATGGCCAAGCCGCAAAAGAACCTTCAGGGTTCTGTAGGTGAGATCATCGAAAACCCGATCATCTCAAACTTTAAAGAAGGACTGGATGTATTGGAGTACTTCATCTCCACACACGGTGCCAGAAAAGGTCTTGCCGATACAGCTCTTAAAACAGCGGATGCCGGTTACCTGACCAGAAGACTTGTGGACGTAGCTCAGGATGTTGTTATCAACGAATCTGATTGCGGTACATTAAGAGGTCTGATGGTAACAGCGCTGAAAGACAATGAGGATATCGTTGAATCATTATCAGAAAGAATTCTGGGACGCGTAAGTGTTCATGATATTTTCGATCCGAACAGCAACGAGTTAATTCTTGAGGCAGGCGGAGAAATTACTGAAGAGATTGCCAGAAAGATTGATGAATCGTCAATCGAATCTGTGGAAATTCGCTCTGTGCTGACTTGCGAAACCAAGAGAGGCGTTTGCGGAAAATGCTACGGAAGAAACCTGTCTACCGGTAACATGGTGCAGAAGGGAGAAGCGGTTGGTGTTATCGCTGCGCAATCAATCGGAGAGCCTGGTACACAGCTTACACTGAGAACATTCCACGTGGGAGGTACTGCTTCCAATATCGCTGTCGATGCAAGCATCAGAGCGAAATTTGATGGAGTGATCTTCTTTGATGAGATAAAATCCATCGTAACAACCGATAACGAAGGTGAAAAAGTAAACATCGTAATGGGTAGGTCCGGTGAGATCAAGATCGTGGAGGAAGGAAGTAATAAAGTGCTTATCAGCAGTCACGTTCCTTACGGATCCTTCCTGAAAGTGAAGGAAGGAAAGAAAGTGAAGAAAGGCGAGGAGCTTTGCAGCTGGGATCCATACAATGCGGTTATCTTGTCTGAGTTCGACGGAACTATTGAATTCGAATCGATCGAAGAAGGTATTACCTTCAGAGAGGAATCCGACGAGCAGACAGGTCACAGAGAGAAAGTAATCATCGATACAAAGGATAAAGCAAAAAATCCTGCGATCATGGTGCACTATAAGAAAGGTGATTCAAAAACCTACAACATTCCGGTAGGCGCTCACCTTGCAGTTGAAAACGGAGCTAAAGTTAAATCCGGGCAGGTACTTGCCAAGATACCAAGAGCGATCGGAAAGACCCGCGATATTACCGGAGGTCTTCCAAGAGTTACAGAGCTTTTCGAGGCAAGAAATCCTTCGAACCCGGCTGTAGTTTCAGAAATCGACGGTGTGGTAACATACGGTGGCGTGAAGAGAGGGAACAGAGAAATCTATATTGAGTCTAAAGACGGTGTGAAGAAGAAATACATGGTACCTCTTTCCAAGCACATCCTGGTTCAGGATAACGACTTTGTGAGAGCCGGTATGGCGCTTTCTGATGGAGCGATTACTCCTTCTGACATTCTCGCTATTAAAGGCCCGACTGCCGTACAGGAATACCTGGTAAATGAAATCCAGGAAGTTTACAGATTGCAGGGTGTAAAGATCAACGATAAACACATCGAGGCGATTGTAAGACAAATGATGCAGAAAGTGGAAATCATCGAAGGTGGTGATACAAACTTCCTGACTAATCAGATCGTAGACAGATTTACCTTCAGAGAAGAGAATGACCTGGTGCTTGACAAGAAAGTTGTC
PROTEIN sequence
Length: 1297
MAFRKNKKLNQDFNKVTISLASPESILESSYGEVTQPETINYRTYKPEMGGLFCERIFGPVKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPIAHIWYFRSLPNKIGYLLGLPTKKLDQIIYYERYVVIQPGIKAEDGINYLDFLTEDEYLDILDKLPRENQMLDDEDPNKFIAKMGAESLEMLLSRIKLDELSYSLRHAAANDTSQQRKAEALKRLKVVEAFREARTRIENKPEWMIIKMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAPEVILRNEKRMLQEAVDSLFDNSRKVNAVRAEGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHECGLPKDMAAELFKPFIIRKLIERGIVKTVKSAKKIVDRKDPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLGHEAILEASMLMLASHNILNPANGAPITVPSQDMVLGLYYVTKGRKGTKESPVLGEGKIFYGSEEVVIALNEGRLSQHAHIKVRTQVKDENGKLKTKVIETVAGRVLFNLMVPEQVGYVNELLTKKKLQQIISQVHKAAGMARTAQFLDDIKQLGFQSAFKGGLSIGLSDVKVPDDKNGLIEGAKKDVVAVWNNYLMGLITDNERYNQVIDIWTRVNSQITETLMRQLESDNQGFNSIYMMMHSGARGSREQIRQLGGMRGLMAKPQKNLQGSVGEIIENPIISNFKEGLDVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVVINESDCGTLRGLMVTALKDNEDIVESLSERILGRVSVHDIFDPNSNELILEAGGEITEEIARKIDESSIESVEIRSVLTCETKRGVCGKCYGRNLSTGNMVQKGEAVGVIAAQSIGEPGTQLTLRTFHVGGTASNIAVDASIRAKFDGVIFFDEIKSIVTTDNEGEKVNIVMGRSGEIKIVEEGSNKVLISSHVPYGSFLKVKEGKKVKKGEELCSWDPYNAVILSEFDGTIEFESIEEGITFREESDEQTGHREKVIIDTKDKAKNPAIMVHYKKGDSKTYNIPVGAHLAVENGAKVKSGQVLAKIPRAIGKTRDITGGLPRVTELFEARNPSNPAVVSEIDGVVTYGGVKRGNREIYIESKDGVKKKYMVPLSKHILVQDNDFVRAGMALSDGAITPSDILAIKGPTAVQEYLVNEIQEVYRLQGVKINDKHIEAIVRQMMQKVEIIEGGDTNFLTNQIVDRFTFREENDLVLDKKVV