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H3-16-all-fractions_k255_3778117_2

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: comp(3990..7862)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 1290.0
  • Bit_score: 2321
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 1290.0
  • Bit_score: 2215
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Nafulsella turpanensis RepID=UPI0003487436 similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 1290.0
  • Bit_score: 2231
  • Evalue 0.0

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3873
TTGGCTAACAATAAAAATTCTGAAAGAATCAGTTTTGCATCCATTAAATCAGGAATCGATTACCCGGATTTCCTCGATGTACAGCTACAATCATTTAAAGATTTCTTTCAGCTCGAAACTCCTGCTGAGAATAGAGCAAAGGAAGGCCTGTATAAGGTATTTTCCGAAAACTTTCCGATCACAGACTCAAGAGAAAACTTCGTTCTTGAATTCATAGATTATATGATCGATCCTCCGAAATATTCGGTAGATGAATGCATCGACAGAGGCTTAACCTATTCAGTACCGCTTAAAGCGAAGCTGCGCCTCTCATGCAATGATGAGGATAACGAAGATTTCGAAACAGTAGAACAAGAAGTATTCTTAGGGAATATTCCTTATATGACTGAAAAAGGCTCTTTCATCATCAATGGTGCAGAAAGAGTTATTGTTTCCCAGCTTCATAGATCACCAGGGGTATTCTTTGCTCAAAGCAAACATACCAACGGAACGAAATTATATTCTGCCAGAATTATTCCATTCAAGGGAAGCTGGATAGAGTTTGCGACCGACGTTAATAATGTGATGTTCTCATACATCGACAGAAAGAAGAAATTCCCTGTTACTACTTTGTTACGTGCCATCGGTTACGGTTCAGATAAAGATATTCTTGATCTGTTCGGACTTTCTGAAGAGATTCAGGCTAATAAAGCGGCTCTTAAAAAAGTGATCGGCAGAAAGCTTGCTGCAAGAGTTCTTCGCACATGGACTGAAGACTTTGTGGATGAGGATACCGGAGAAGTTGTTTCTATTGACAGAAACGAAGTTCTCATGGAAAGAGATTCTGTGGTCAAGGAAGAGGATATTCAAACCATCGTTGATTCAGGATCTAAATCTATTATCCTGCACAGAGAGGATATCAACATTGCCGACTACACAATCATCTACAATACGCTTCAGAAAGACAATTCAAATTCTGAAAAAGAAGCGGTAGAGCAGATCTACAGACAATTAAGAAATACCGAGGCTCCTGACGAACAGACAGCCCGCGATATTATCCATAACCTGTTCTTCTCTGACAAGAGATATGACCTTGGTGAGGTAGGAAGATACAGGATCAATAAAAAATTAGGATTGGAAATCACTTCCGACATCCGCGTTTTAACGACTCAGGATATTATCTGTATCGTGAAGTACCTGATCGGTCTGATCAACTCCAAAGCAGTAGTGGATGATATTGACCACTTAAGCAACAGACGTGTACGTACCGTAGGCGAGCAGCTATACAGCCAGTTCGGCGTCGGTCTTGCCAGAATGGCACGTACCATCAAAGAAAGAATGAATGTGCGTGATAACGAAGACTTCAAACCAGTCGACCTTATCAATGCCCGTACATTGTCTTCCGTGATCAACTCTTTCTTCGGAACGAATCAGTTATCACAGTTCATGGATCAAACCAATCCTCTTGCGGAAATCACTCACAAGAGAAGAATGTCGGCACTCGGCCCAGGCGGTCTTTCAAGAGAAAGAGCCGGATTCGAGGTTCGTGACGTTCACTACACGCACTACGGTCGTCTGTGTACTATCGAAACTCCCGAAGGTCCGAACATCGGTCTTATCTCTTCACTTTGCGTGCATGCAAAAGTAAATCACATGGGCTTCATTGAAACCCCATACCGCAAAGTTGAAAAGGGTAAAGTAAATCTGAAAGAAAACGTTATCTACCTCACAGCTGAGGAAGAAGACACTCATAATATCGCTCAGGCAAATGCGGAAGTGGATGATAAAGGAAACTTTATGATCGACCGCGTTAAAGCCAGGTACGAAGGTGACTTCCCTGTCGTAGAGCCTGAGAAGATTTCATATATGGATGTGGCTCCGAACCAGATCGTTTCTGTTGCGGCATCACTGATTCCATTCCTTGAGCATGATGATGCTAACCGTGCCCTGATGGGTTCGAACATGCAGCGTCAGGCAGTGCCTCTTTTAAAACCGGAAGCTCCGATCGTGGGTACCGGCCTTGAGAAGAGAGTGGCCCTTGATTCAAGAGCTCTGATCCTTGCAGAAGGCGGAGGCGTTGTTGAATTTGTAGATGCCACTAAAATTGTTGTAAGATATGATCTTACCAAGGACGAGCAGATGGTTAGCTTCGATACGGAGACAATCACCTATGACCTTGTAAAATTCAGAAGAACAAACCAAGATACCTGCATCAATCTTAAGCCGATCGTTTTCAAAGGCGAGAAACTTGTGAAGGGGCAGCCTCTGTGCGAAGGATACGCGACAAACCAGGGAGAGCTTGCTCTCGGAAGAAACCTTCAGGTGGCATTCATGCCATGGCAGGGATATAACTTCGAGGATGCAATTGTAATTTCTGAAAAAGTAGTTCGTGATGATATTTTCACTTCAATCCACATCGAGGAATTCGAACTTGAAGTAAGAGATACAAAACGCGGTGAAGAAGAACTGACTTCTGAAATTCCAAATGTTAGCGAAGAGGCCGTTAAGAACCTTGACGAGAACGGAATTATCAGGGTAGGAGCTGAAGTGAAAGAAGGAGATATTCTGATCGGTAAGATCACTCCTAAGGGAGAAACAGACCCGACTCCGGAAGAAAAACTTCTAAGAGCGATCTTCGGAGACAAGGCAGGCGATGTGAAAGATGCTTCATTAAAAGCTTCTCCATCTCTGAAAGGCGTTGTAATTGACACCAAGCTGTTCTCTCGTCCGAAAAAAGATAAAGATCTCAGATCTAAATCCAAGAAGCAGGTAGATACATTGAAGGCTAAATACAGCAAAGATCTTCTTGGTCTTCGTGCGATCATGATCGATAAAATGACTGACCTTCTTGATGGTAAAGTGAGCAATGGCGTGAAGCACAGATTCGGTGACGAAGTGCTTGCTAAAGGCGTTAAGTTTGCCAAGAAGAACATTACAGAAGCGATCTTCCCGGATAAGAATATTTACAGGGATGAGAGCACATATAATGTTCAGGAAGAAGTAAACCTGATTTCTGATCTTATCCTCGAAAACTGGACAAGCAGCCAGAAAACGAACGAAATGCTGATTGATCTTGTAAGAAACTTCAACAAGAAGAGAAACGAGATCGCCGGCAGATTCAAGAGAGAAAGATTTACGCTGGAGGTAGGCGATGAGCTTCCTGCAGGTATCGTACAGCTTGCTAAGGTATATGTTGCTAAGAAACGTAAACTGAAGGTGGGTGATAAAATGGCGGGACGCCACGGAAATAAAGGGGTGGTAGCAAGAATCGTCCGTGACGAGGATATGCCATTCCTGGAAGACGGAACTCCAATGGATATCGTTCTTAATCCGCTCGGTGTACCTTCCCGTATGAACCTTGGTCAGATCTATGAAACCGTTCTGGGATGGGCTGGATTAAGGACCGGCAAGAAATACGCTACGCCGATTTTCGACGGAGCTTCTGAAGAGCAGGTAGCTGCTGAGCTGAAAGGCGCAGGCATACCAGAGCTTGGAAGAACATATCTGTACGATGGACTTTCCGGACATAGATTTGACCAGAAAGTAACAGTCGGCGTCATTTACATGCTGAAGCTCGGTCACCTTGTGGATGATAAGATGCACGCACGTTCTATCGGTCCGTACTCACTCATCACTCAGCAGCCTCTTGGCGGTAAAGCCCAGTTCGGAGGTCAGAGATTCGGAGAAATGGAAGTTTGGGCTCTCGAAGCATTCGGAGCTGCGAACGTTCTTCAGGAAATCCTCACCGTTAAGTCAGACGACGTAATCGGAAGAGCGAAAGCTTACGAAGCGATCGTGAAAGGTGAGAATATGCCGAAGCCGAATATCCCTGAATCGTTCAATGTACTTGTACATGAACTGAGAGGTCTGGCTCTTGAAATCACGTTAGATTAA
PROTEIN sequence
Length: 1291
LANNKNSERISFASIKSGIDYPDFLDVQLQSFKDFFQLETPAENRAKEGLYKVFSENFPITDSRENFVLEFIDYMIDPPKYSVDECIDRGLTYSVPLKAKLRLSCNDEDNEDFETVEQEVFLGNIPYMTEKGSFIINGAERVIVSQLHRSPGVFFAQSKHTNGTKLYSARIIPFKGSWIEFATDVNNVMFSYIDRKKKFPVTTLLRAIGYGSDKDILDLFGLSEEIQANKAALKKVIGRKLAARVLRTWTEDFVDEDTGEVVSIDRNEVLMERDSVVKEEDIQTIVDSGSKSIILHREDINIADYTIIYNTLQKDNSNSEKEAVEQIYRQLRNTEAPDEQTARDIIHNLFFSDKRYDLGEVGRYRINKKLGLEITSDIRVLTTQDIICIVKYLIGLINSKAVVDDIDHLSNRRVRTVGEQLYSQFGVGLARMARTIKERMNVRDNEDFKPVDLINARTLSSVINSFFGTNQLSQFMDQTNPLAEITHKRRMSALGPGGLSRERAGFEVRDVHYTHYGRLCTIETPEGPNIGLISSLCVHAKVNHMGFIETPYRKVEKGKVNLKENVIYLTAEEEDTHNIAQANAEVDDKGNFMIDRVKARYEGDFPVVEPEKISYMDVAPNQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPLLKPEAPIVGTGLEKRVALDSRALILAEGGGVVEFVDATKIVVRYDLTKDEQMVSFDTETITYDLVKFRRTNQDTCINLKPIVFKGEKLVKGQPLCEGYATNQGELALGRNLQVAFMPWQGYNFEDAIVISEKVVRDDIFTSIHIEEFELEVRDTKRGEEELTSEIPNVSEEAVKNLDENGIIRVGAEVKEGDILIGKITPKGETDPTPEEKLLRAIFGDKAGDVKDASLKASPSLKGVVIDTKLFSRPKKDKDLRSKSKKQVDTLKAKYSKDLLGLRAIMIDKMTDLLDGKVSNGVKHRFGDEVLAKGVKFAKKNITEAIFPDKNIYRDESTYNVQEEVNLISDLILENWTSSQKTNEMLIDLVRNFNKKRNEIAGRFKRERFTLEVGDELPAGIVQLAKVYVAKKRKLKVGDKMAGRHGNKGVVARIVRDEDMPFLEDGTPMDIVLNPLGVPSRMNLGQIYETVLGWAGLRTGKKYATPIFDGASEEQVAAELKGAGIPELGRTYLYDGLSGHRFDQKVTVGVIYMLKLGHLVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAFGAANVLQEILTVKSDDVIGRAKAYEAIVKGENMPKPNIPESFNVLVHELRGLALEITLD*