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H3-16-all-fractions_k255_4213748_11

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: 8073..8579

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Spirosoma spitsbergense RepID=UPI0003601DA0 similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 168.0
  • Bit_score: 190
  • Evalue 1.10e-45
RNA polymerase sigma factor {ECO:0000313|EMBL:GAL87765.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 168.0
  • Bit_score: 320
  • Evalue 1.00e-84
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 168.0
  • Bit_score: 186
  • Evalue 5.90e-45

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 507
ATGACAGCAGTTGAATTCAATGATCTGGTTTATTCCGCCTCTAAATCTTTAAAGATTCCGGCGCTTAAATTCACCCACAATCACAATGATGCCAATGATCTGATTCAGGACACCATTCTGAAAGCACTGAGAAACCGAACGAAGTTCAAAACAGGCACCAATATTAAAGCCTGGCTGTACATTATCATGAAAAATACGTTTATCAGCAACTACCATAAAATCGATAAAAGAAACACGCTGGTCGATCCGATCGACGAGGGGTATAACTTCAATGTTTCCAGTACAATCTCCCATAACCTGGGTGCGTCCAACATTGCTTCCAAAGAAATCAACAAAGCCATCAATAACCTGGATAAAACATTCAGGGTGCCTTTTATGATGCACTATGAGGGCTTCAAATACAACGAAATTGCTGAACATCTTAATATTCCAATGGGAACGGTCAAAAACCGTATTCACGTAGCACGTAAAAACCTGATGGAATCTCTTGGAGAGTATAAATACTAG
PROTEIN sequence
Length: 169
MTAVEFNDLVYSASKSLKIPALKFTHNHNDANDLIQDTILKALRNRTKFKTGTNIKAWLYIIMKNTFISNYHKIDKRNTLVDPIDEGYNFNVSSTISHNLGASNIASKEINKAINNLDKTFRVPFMMHYEGFKYNEIAEHLNIPMGTVKNRIHVARKNLMESLGEYKY*